Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 ROM2YLR371W 4071 nt1.06□□□□□ -2.24
RPL40AP0CH08 RPL31AYDL075W 342 nt1.06□□□□□ -2.24
RPL40AP0CH08 YGL242CYGL242C 546 nt1.06□□□□□ -2.24
RPL40AP0CH08 PEP8YJL053W 1140 nt1.06□□□□□ -2.24
RPL40AP0CH08 YMR175W-AYMR175W-A 195 nt1.06□□□□□ -2.24
RPL40AP0CH08 GIM3YNL153C 390 nt1.06□□□□□ -2.24
RPL40AP0CH08 SRL4YPL033C 846 nt1.06□□□□□ -2.24
RPL40AP0CH08 FRK1YPL141C 2598 nt1.05□□□□□ -2.24
RPL40AP0CH08 AEP1YMR064W 1557 nt1.05□□□□□ -2.24
RPL40AP0CH08 AIM6YDL237W 1173 nt1.05□□□□□ -2.24
RPL40AP0CH08 YGL177WYGL177W 348 nt1.05□□□□□ -2.24
RPL40AP0CH08 YJL114WYJL114W 681 nt1.05□□□□□ -2.24
RPL40AP0CH08 STB4YMR019W 2850 nt1.05□□□□□ -2.24
RPL40AP0CH08 BUD3YCL014W 4911 nt1.04□□□□□ -2.24
RPL40AP0CH08 YDR336WYDR336W 945 nt1.04□□□□□ -2.24
RPL40AP0CH08 YPT52YKR014C 705 nt1.04□□□□□ -2.24
RPL40AP0CH08 YOL159CYOL159C 516 nt1.04□□□□□ -2.24
RPL40AP0CH08 PSO2YMR137C 1986 nt1.04□□□□□ -2.24
RPL40AP0CH08 YDR338CYDR338C 2088 nt1.04□□□□□ -2.24
RPL40AP0CH08 PTC5YOR090C 1719 nt1.03□□□□□ -2.24
RPL40AP0CH08 VMR1YHL035C 4779 nt1.03□□□□□ -2.24
RPL40AP0CH08 YFR056CYFR056C 369 nt1.03□□□□□ -2.24
RPL40AP0CH08 YHR022CYHR022C 771 nt1.03□□□□□ -2.24
RPL40AP0CH08 YKL065W-AYKL065W-A 222 nt1.03□□□□□ -2.24
RPL40AP0CH08 BLS1YLR408C 369 nt1.03□□□□□ -2.24
RPL40AP0CH08 DIA1YMR316W 1011 nt1.03□□□□□ -2.24
RPL40AP0CH08 RIO2YNL207W 1278 nt1.03□□□□□ -2.24
RPL40AP0CH08 SFG1YOR315W 1041 nt1.03□□□□□ -2.24
RPL40AP0CH08 CUP9YPL177C 921 nt1.03□□□□□ -2.24
RPL40AP0CH08 BTT1YDR252W 450 nt1.02□□□□□ -2.25
RPL40AP0CH08 KEG1YFR042W 603 nt1.02□□□□□ -2.25
RPL40AP0CH08 HOP2YGL033W 657 nt1.02□□□□□ -2.25
RPL40AP0CH08 YET1YKL065C 621 nt1.02□□□□□ -2.25
RPL40AP0CH08 UBP11YKR098C 2154 nt1.02□□□□□ -2.25
RPL40AP0CH08 RUF20RUF20 443 nt1.02□□□□□ -2.25
RPL40AP0CH08 PKH2YOL100W 3246 nt1.02□□□□□ -2.25
RPL40AP0CH08 BUL2YML111W 2763 nt1.01□□□□□ -2.25
RPL40AP0CH08 RGI1YER067W 486 nt1.01□□□□□ -2.25
RPL40AP0CH08 FYV4YHR059W 393 nt1.01□□□□□ -2.25
RPL40AP0CH08 SUI2YJR007W 915 nt1.01□□□□□ -2.25
RPL40AP0CH08 RXT2YBR095C 1293 nt1.01□□□□□ -2.25
RPL40AP0CH08 YSY6YBR162W-A 198 nt1.01□□□□□ -2.25
RPL40AP0CH08 RPH1YER169W 2391 nt1□□□□□ -2.25
RPL40AP0CH08 YDL062WYDL062W 426 nt1□□□□□ -2.25
RPL40AP0CH08 YER091C-AYER091C-A 222 nt1□□□□□ -2.25
RPL40AP0CH08 YGL165CYGL165C 579 nt1□□□□□ -2.25
RPL40AP0CH08 YJL032WYJL032W 315 nt1□□□□□ -2.25
RPL40AP0CH08 YLR042CYLR042C 486 nt1□□□□□ -2.25
RPL40AP0CH08 YML009C-AYML009C-A 327 nt1□□□□□ -2.25
RPL40AP0CH08 YMR242W-AYMR242W-A 90 nt1□□□□□ -2.25
RPL40AP0CH08 GAL7YBR018C 1101 nt1□□□□□ -2.25
RPL40AP0CH08 YPL135C-AYPL135C-A 174 nt1□□□□□ -2.25
RPL40AP0CH08 ERV15YBR210W 429 nt1□□□□□ -2.25
RPL40AP0CH08 SMC4YLR086W 4257 nt1□□□□□ -2.25
RPL40AP0CH08 ULP2YIL031W 3105 nt1□□□□□ -2.25
RPL40AP0CH08 RAD9YDR217C 3930 nt0.99□□□□□ -2.25
RPL40AP0CH08 YHR214C-CYHR214C-C 1437 nt0.99□□□□□ -2.25
RPL40AP0CH08 SPE1YKL184W 1401 nt0.99□□□□□ -2.25
RPL40AP0CH08 RPL34BYIL052C 366 nt0.99□□□□□ -2.25
RPL40AP0CH08 YIL082WYIL082W 873 nt0.99□□□□□ -2.25
RPL40AP0CH08 CSI2YOL007C 1026 nt0.99□□□□□ -2.25
RPL40AP0CH08 MIX23YBL107C 591 nt0.99□□□□□ -2.25
RPL40AP0CH08 PET123YOR158W 957 nt0.99□□□□□ -2.25
RPL40AP0CH08 VAM6YDL077C 3150 nt0.98□□□□□ -2.25
RPL40AP0CH08 AHC2YCR082W 387 nt0.98□□□□□ -2.25
RPL40AP0CH08 POP6YGR030C 477 nt0.98□□□□□ -2.25
RPL40AP0CH08 SAY1YGR263C 1275 nt0.98□□□□□ -2.25
RPL40AP0CH08 PFS1YHR185C 714 nt0.98□□□□□ -2.25
RPL40AP0CH08 YKE2YLR200W 345 nt0.98□□□□□ -2.25
RPL40AP0CH08 MTG1YMR097C 1104 nt0.98□□□□□ -2.25
RPL40AP0CH08 BST1YFL025C 3090 nt0.98□□□□□ -2.25
RPL40AP0CH08 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
RPL40AP0CH08 CTR9YOL145C 3234 nt0.98□□□□□ -2.25
RPL40AP0CH08 COG7YGL005C 840 nt0.97□□□□□ -2.25
RPL40AP0CH08 GTR2YGR163W 1026 nt0.97□□□□□ -2.25
RPL40AP0CH08 SFM1YOR021C 642 nt0.97□□□□□ -2.25
RPL40AP0CH08 EGD1YPL037C 474 nt0.97□□□□□ -2.25
RPL40AP0CH08 ADF1YCL058W-A 342 nt0.97□□□□□ -2.25
RPL40AP0CH08 PRP16YKR086W 3216 nt0.97□□□□□ -2.25
RPL40AP0CH08 NUR1YDL089W 1455 nt0.97□□□□□ -2.25
RPL40AP0CH08 COX1Q0045 1605 nt0.97□□□□□ -2.25
RPL40AP0CH08 SNF5YBR289W 2718 nt0.96□□□□□ -2.26
RPL40AP0CH08 MSN5YDR335W 3675 nt0.96□□□□□ -2.26
RPL40AP0CH08 YCR090CYCR090C 549 nt0.96□□□□□ -2.26
RPL40AP0CH08 BNA7YDR428C 786 nt0.96□□□□□ -2.26
RPL40AP0CH08 YER023C-AYER023C-A 213 nt0.96□□□□□ -2.26
RPL40AP0CH08 FAR3YMR052W 615 nt0.96□□□□□ -2.26
RPL40AP0CH08 ARL3YPL051W 597 nt0.96□□□□□ -2.26
RPL40AP0CH08 TRS65YGR166W 1683 nt0.96□□□□□ -2.26
RPL40AP0CH08 CRM1YGR218W 3255 nt0.96□□□□□ -2.26
RPL40AP0CH08 NOP53YPL146C 1368 nt0.96□□□□□ -2.26
RPL40AP0CH08 RSM22YKL155C 1887 nt0.95□□□□□ -2.26
RPL40AP0CH08 YER046W-AYER046W-A 330 nt0.95□□□□□ -2.26
RPL40AP0CH08 SRP21YKL122C 504 nt0.95□□□□□ -2.26
RPL40AP0CH08 YLR140WYLR140W 327 nt0.95□□□□□ -2.26
RPL40AP0CH08 CMC2YBL059C-A 330 nt0.95□□□□□ -2.26
RPL40AP0CH08 RPB5YBR154C 648 nt0.95□□□□□ -2.26
RPL40AP0CH08 YBP2YGL060W 1926 nt0.95□□□□□ -2.26
RPL40AP0CH08 SNA4YDL123W 423 nt0.94□□□□□ -2.26
RPL40AP0CH08 YDL157CYDL157C 357 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 142 ms