Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UPK1BO75841 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.83■□□□□ 0.44
UPK1BO75841 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UPK1BO75841 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.83■□□□□ 0.44
UPK1BO75841 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.83■□□□□ 0.44
UPK1BO75841 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.83■□□□□ 0.44
UPK1BO75841 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK1BO75841 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UPK1BO75841 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1BO75841 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
UPK1BO75841 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
UPK1BO75841 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.82■□□□□ 0.44
UPK1BO75841 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPK1BO75841 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
UPK1BO75841 FZD10-202ENST00000539839 3282 ntBASIC17.82■□□□□ 0.44
UPK1BO75841 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1BO75841 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UPK1BO75841 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 AP000997.3-201ENST00000623333 2250 ntBASIC17.81■□□□□ 0.44
UPK1BO75841 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.81■□□□□ 0.44
UPK1BO75841 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
UPK1BO75841 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
UPK1BO75841 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1BO75841 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
UPK1BO75841 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK1BO75841 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UPK1BO75841 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK1BO75841 AL034346.1-201ENST00000568244 1277 ntBASIC17.8■□□□□ 0.44
UPK1BO75841 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.8■□□□□ 0.44
UPK1BO75841 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK1BO75841 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
UPK1BO75841 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UPK1BO75841 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1BO75841 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UPK1BO75841 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 AC005703.6-201ENST00000623265 1329 ntBASIC17.79■□□□□ 0.44
UPK1BO75841 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UPK1BO75841 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK1BO75841 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
UPK1BO75841 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK1BO75841 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms