Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 SET3YKR029C 2256 nt1.07□□□□□ -2.24
TY1B-HO13535 ATG10YLL042C 504 nt1.07□□□□□ -2.24
TY1B-HO13535 YAL069WYAL069W 315 nt1.07□□□□□ -2.24
TY1B-HO13535 TEX1YNL253W 1269 nt1.07□□□□□ -2.24
TY1B-HO13535 NGL1YOL042W 1092 nt1.07□□□□□ -2.24
TY1B-HO13535 FIG1YBR040W 897 nt1.07□□□□□ -2.24
TY1B-HO13535 APL3YBL037W 3078 nt1.07□□□□□ -2.24
TY1B-HO13535 APL1YJR005W 2103 nt1.07□□□□□ -2.24
TY1B-HO13535 YEA4YEL004W 1029 nt1.06□□□□□ -2.24
TY1B-HO13535 DSE2YHR143W 978 nt1.06□□□□□ -2.24
TY1B-HO13535 HHT2YNL031C 411 nt1.06□□□□□ -2.24
TY1B-HO13535 RIO2YNL207W 1278 nt1.06□□□□□ -2.24
TY1B-HO13535 SRL1YOR247W 633 nt1.06□□□□□ -2.24
TY1B-HO13535 MNL2YLR057W 2550 nt1.06□□□□□ -2.24
TY1B-HO13535 CRM1YGR218W 3255 nt1.06□□□□□ -2.24
TY1B-HO13535 RPL16AYIL133C 600 nt1.06□□□□□ -2.24
TY1B-HO13535 GPN3YLR243W 819 nt1.06□□□□□ -2.24
TY1B-HO13535 PRM6YML047C 1059 nt1.06□□□□□ -2.24
TY1B-HO13535 YIR036W-AYIR036W-A 402 nt1.05□□□□□ -2.24
TY1B-HO13535 SPR3YGR059W 1539 nt1.04□□□□□ -2.24
TY1B-HO13535 PES4YFR023W 1836 nt1.04□□□□□ -2.24
TY1B-HO13535 RPL35BYDL136W 363 nt1.04□□□□□ -2.24
TY1B-HO13535 YGL006W-AYGL006W-A 111 nt1.04□□□□□ -2.24
TY1B-HO13535 FSH1YHR049W 732 nt1.04□□□□□ -2.24
TY1B-HO13535 ATG38YLR211C 681 nt1.04□□□□□ -2.24
TY1B-HO13535 YML047W-AYML047W-A 366 nt1.04□□□□□ -2.24
TY1B-HO13535 DSE1YER124C 1722 nt1.04□□□□□ -2.24
TY1B-HO13535 snR68snR68 136 nt1.03□□□□□ -2.24
TY1B-HO13535 UPF3YGR072W 1164 nt1.03□□□□□ -2.24
TY1B-HO13535 YLR169WYLR169W 354 nt1.03□□□□□ -2.24
TY1B-HO13535 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
TY1B-HO13535 KAP120YPL125W 3099 nt1.02□□□□□ -2.25
TY1B-HO13535 AI1Q0050 2505 nt1.02□□□□□ -2.25
TY1B-HO13535 HMI1YOL095C 2121 nt1.02□□□□□ -2.25
TY1B-HO13535 RXT2YBR095C 1293 nt1.02□□□□□ -2.25
TY1B-HO13535 SRB4YER022W 2064 nt1.01□□□□□ -2.25
TY1B-HO13535 YGR219WYGR219W 342 nt1.01□□□□□ -2.25
TY1B-HO13535 TEN1YLR010C 483 nt1.01□□□□□ -2.25
TY1B-HO13535 VPS28YPL065W 729 nt1.01□□□□□ -2.25
TY1B-HO13535 AI3Q0060 1248 nt1□□□□□ -2.25
TY1B-HO13535 GTR2YGR163W 1026 nt1□□□□□ -2.25
TY1B-HO13535 YLR311CYLR311C 348 nt1□□□□□ -2.25
TY1B-HO13535 RPL6BYLR448W 531 nt1□□□□□ -2.25
TY1B-HO13535 snR35snR35 204 nt1□□□□□ -2.25
TY1B-HO13535 YOR343W-BYOR343W-B 5313 nt0.99□□□□□ -2.25
TY1B-HO13535 ATP16YDL004W 483 nt0.99□□□□□ -2.25
TY1B-HO13535 PEX15YOL044W 1152 nt0.99□□□□□ -2.25
TY1B-HO13535 YPR074W-AYPR074W-A 171 nt0.99□□□□□ -2.25
TY1B-HO13535 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
TY1B-HO13535 YNL284C-BYNL284C-B 5268 nt0.99□□□□□ -2.25
TY1B-HO13535 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
TY1B-HO13535 STE5YDR103W 2754 nt0.99□□□□□ -2.25
TY1B-HO13535 SMD3YLR147C 306 nt0.98□□□□□ -2.25
TY1B-HO13535 RAD10YML095C 633 nt0.98□□□□□ -2.25
TY1B-HO13535 YNL089CYNL089C 477 nt0.98□□□□□ -2.25
TY1B-HO13535 MUM2YBR057C 1101 nt0.98□□□□□ -2.25
TY1B-HO13535 YLR149CYLR149C 2193 nt0.98□□□□□ -2.25
TY1B-HO13535 STB4YMR019W 2850 nt0.98□□□□□ -2.25
TY1B-HO13535 CTK3YML112W 891 nt0.98□□□□□ -2.25
TY1B-HO13535 CUP9YPL177C 921 nt0.98□□□□□ -2.25
TY1B-HO13535 YNL162W-AYNL162W-A 219 nt0.97□□□□□ -2.25
TY1B-HO13535 NOP53YPL146C 1368 nt0.97□□□□□ -2.25
TY1B-HO13535 KAP122YGL016W 3246 nt0.97□□□□□ -2.25
TY1B-HO13535 YGL039WYGL039W 1047 nt0.96□□□□□ -2.26
TY1B-HO13535 GIM3YNL153C 390 nt0.96□□□□□ -2.26
TY1B-HO13535 snR191snR191 274 nt0.96□□□□□ -2.26
TY1B-HO13535 RKR1YMR247C 4689 nt0.96□□□□□ -2.26
TY1B-HO13535 YLR307C-AYLR307C-A 264 nt0.96□□□□□ -2.26
TY1B-HO13535 ZRG8YER033C 3231 nt0.95□□□□□ -2.26
TY1B-HO13535 MDM36YPR083W 1740 nt0.95□□□□□ -2.26
TY1B-HO13535 SST2YLR452C 2097 nt0.95□□□□□ -2.26
TY1B-HO13535 FIP1YJR093C 984 nt0.95□□□□□ -2.26
TY1B-HO13535 TCA17YEL048C 459 nt0.94□□□□□ -2.26
TY1B-HO13535 YGR290WYGR290W 444 nt0.94□□□□□ -2.26
TY1B-HO13535 YNL067W-AYNL067W-A 147 nt0.94□□□□□ -2.26
TY1B-HO13535 NOP15YNL110C 663 nt0.94□□□□□ -2.26
TY1B-HO13535 MER1YNL210W 813 nt0.94□□□□□ -2.26
TY1B-HO13535 YNL034WYNL034W 1839 nt0.94□□□□□ -2.26
TY1B-HO13535 YFR054CYFR054C 579 nt0.93□□□□□ -2.26
TY1B-HO13535 DYN3YMR299C 939 nt0.93□□□□□ -2.26
TY1B-HO13535 SRL4YPL033C 846 nt0.93□□□□□ -2.26
TY1B-HO13535 GCD2YGR083C 1956 nt0.93□□□□□ -2.26
TY1B-HO13535 NUP145YGL092W 3954 nt0.93□□□□□ -2.26
TY1B-HO13535 TAH1YCR060W 336 nt0.93□□□□□ -2.26
TY1B-HO13535 MFA1YDR461W 111 nt0.93□□□□□ -2.26
TY1B-HO13535 GRX7YBR014C 612 nt0.93□□□□□ -2.26
TY1B-HO13535 snR63snR63 255 nt0.92□□□□□ -2.26
TY1B-HO13535 LDH1YBR204C 1128 nt0.92□□□□□ -2.26
TY1B-HO13535 YCL001W-AYCL001W-A 462 nt0.92□□□□□ -2.26
TY1B-HO13535 YHR022CYHR022C 771 nt0.91□□□□□ -2.26
TY1B-HO13535 YIR020C-BYIR020C-B 735 nt0.91□□□□□ -2.26
TY1B-HO13535 UBX4YMR067C 1251 nt0.91□□□□□ -2.26
TY1B-HO13535 YOL050CYOL050C 321 nt0.91□□□□□ -2.26
TY1B-HO13535 YCR108CYCR108C 192 nt0.91□□□□□ -2.26
TY1B-HO13535 CIC1YHR052W 1131 nt0.91□□□□□ -2.26
TY1B-HO13535 YOR161W-BYOR161W-B 261 nt0.91□□□□□ -2.26
TY1B-HO13535 MRPL40YPL173W 894 nt0.91□□□□□ -2.26
TY1B-HO13535 YPD1YDL235C 504 nt0.9□□□□□ -2.27
TY1B-HO13535 FYV4YHR059W 393 nt0.9□□□□□ -2.27
TY1B-HO13535 IFH1YLR223C 3258 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms