Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 tD(GUC)J2tD(GUC)J2 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)J3tD(GUC)J3 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)J4tD(GUC)J4 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)KtD(GUC)K 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)L1tD(GUC)L1 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)L2tD(GUC)L2 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)MtD(GUC)M 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)OtD(GUC)O 72 nt7.72□□□□□ -1.17
VBA1Q04301 YPL222C-AYPL222C-A 246 nt7.72□□□□□ -1.17
VBA1Q04301 MDL2YPL270W 2322 nt7.71□□□□□ -1.18
VBA1Q04301 RAD23YEL037C 1197 nt7.71□□□□□ -1.18
VBA1Q04301 PRY1YJL079C 900 nt7.71□□□□□ -1.18
VBA1Q04301 MIM1YOL026C 342 nt7.71□□□□□ -1.18
VBA1Q04301 EAF3YPR023C 1206 nt7.71□□□□□ -1.18
VBA1Q04301 SAC7YDR389W 1965 nt7.7□□□□□ -1.18
VBA1Q04301 YLR111WYLR111W 333 nt7.7□□□□□ -1.18
VBA1Q04301 MCM5YLR274W 2328 nt7.69□□□□□ -1.18
VBA1Q04301 ERG13YML126C 1476 nt7.69□□□□□ -1.18
VBA1Q04301 THI72YOR192C 1800 nt7.69□□□□□ -1.18
VBA1Q04301 NPP2YEL016C 1482 nt7.68□□□□□ -1.18
VBA1Q04301 YDR510C-AYDR510C-A 117 nt7.68□□□□□ -1.18
VBA1Q04301 OYE2YHR179W 1203 nt7.68□□□□□ -1.18
VBA1Q04301 LSB5YCL034W 1065 nt7.68□□□□□ -1.18
VBA1Q04301 HBS1YKR084C 1836 nt7.68□□□□□ -1.18
VBA1Q04301 GND1YHR183W 1470 nt7.68□□□□□ -1.18
VBA1Q04301 tE(CUC)DtE(CUC)D 72 nt7.66□□□□□ -1.18
VBA1Q04301 tE(CUC)ItE(CUC)I 72 nt7.66□□□□□ -1.18
VBA1Q04301 LSM5YER146W 282 nt7.66□□□□□ -1.18
VBA1Q04301 RPT5YOR117W 1305 nt7.66□□□□□ -1.18
VBA1Q04301 HEM14YER014W 1620 nt7.64□□□□□ -1.19
VBA1Q04301 YMR265CYMR265C 1386 nt7.64□□□□□ -1.19
VBA1Q04301 YDR467CYDR467C 327 nt7.63□□□□□ -1.19
VBA1Q04301 LOT5YKL183W 921 nt7.63□□□□□ -1.19
VBA1Q04301 DAK2YFL053W 1776 nt7.63□□□□□ -1.19
VBA1Q04301 TPS1YBR126C 1488 nt7.62□□□□□ -1.19
VBA1Q04301 MAS1YLR163C 1389 nt7.62□□□□□ -1.19
VBA1Q04301 RFC1YOR217W 2586 nt7.62□□□□□ -1.19
VBA1Q04301 DDI1YER143W 1287 nt7.62□□□□□ -1.19
VBA1Q04301 SMM1YNR015W 1155 nt7.62□□□□□ -1.19
VBA1Q04301 DUR3YHL016C 2208 nt7.62□□□□□ -1.19
VBA1Q04301 GLR1YPL091W 1452 nt7.62□□□□□ -1.19
VBA1Q04301 MTO1YGL236C 2010 nt7.61□□□□□ -1.19
VBA1Q04301 YJL118WYJL118W 660 nt7.61□□□□□ -1.19
VBA1Q04301 ELO1YJL196C 933 nt7.61□□□□□ -1.19
VBA1Q04301 CAB5YDR196C 726 nt7.6□□□□□ -1.19
VBA1Q04301 RIB3YDR487C 627 nt7.6□□□□□ -1.19
VBA1Q04301 HAP5YOR358W 729 nt7.6□□□□□ -1.19
VBA1Q04301 DTR1YBR180W 1719 nt7.6□□□□□ -1.19
VBA1Q04301 TRP2YER090W 1524 nt7.59□□□□□ -1.19
VBA1Q04301 HXT11YOL156W 1704 nt7.59□□□□□ -1.19
VBA1Q04301 TMA23YMR269W 636 nt7.59□□□□□ -1.19
VBA1Q04301 RRT8YOL048C 1029 nt7.59□□□□□ -1.19
VBA1Q04301 ILV2YMR108W 2064 nt7.59□□□□□ -1.19
VBA1Q04301 SUV3YPL029W 2214 nt7.58□□□□□ -1.2
VBA1Q04301 YNR064CYNR064C 873 nt7.58□□□□□ -1.2
VBA1Q04301 THI6YPL214C 1623 nt7.57□□□□□ -1.2
VBA1Q04301 ORT1YOR130C 879 nt7.57□□□□□ -1.2
VBA1Q04301 FIT1YDR534C 1587 nt7.56□□□□□ -1.2
VBA1Q04301 RPN14YGL004C 1254 nt7.56□□□□□ -1.2
VBA1Q04301 YMR226CYMR226C 804 nt7.56□□□□□ -1.2
VBA1Q04301 UFD1YGR048W 1086 nt7.54□□□□□ -1.2
VBA1Q04301 LSB3YFR024C-A 1380 nt7.54□□□□□ -1.2
VBA1Q04301 DUS3YLR401C 2007 nt7.54□□□□□ -1.2
VBA1Q04301 IMO32YGR031W 1029 nt7.53□□□□□ -1.2
VBA1Q04301 YJL055WYJL055W 738 nt7.53□□□□□ -1.2
VBA1Q04301 KEL3YPL263C 1956 nt7.53□□□□□ -1.2
VBA1Q04301 YLR437C-AYLR437C-A 228 nt7.52□□□□□ -1.21
VBA1Q04301 YBL095WYBL095W 813 nt7.52□□□□□ -1.21
VBA1Q04301 SRM1YGL097W 1449 nt7.52□□□□□ -1.21
VBA1Q04301 GTB1YDR221W 2109 nt7.51□□□□□ -1.21
VBA1Q04301 VRG4YGL225W 1014 nt7.51□□□□□ -1.21
VBA1Q04301 YJR114WYJR114W 393 nt7.51□□□□□ -1.21
VBA1Q04301 GPM1YKL152C 744 nt7.51□□□□□ -1.21
VBA1Q04301 snR4snR4 186 nt7.51□□□□□ -1.21
VBA1Q04301 RSC4YKR008W 1878 nt7.51□□□□□ -1.21
VBA1Q04301 CRC1YOR100C 984 nt7.5□□□□□ -1.21
VBA1Q04301 RIB7YBR153W 735 nt7.5□□□□□ -1.21
VBA1Q04301 GAL3YDR009W 1563 nt7.5□□□□□ -1.21
VBA1Q04301 HXT12YIL170W 1374 nt7.49□□□□□ -1.21
VBA1Q04301 AAT1YKL106W 1356 nt7.49□□□□□ -1.21
VBA1Q04301 SFL1YOR140W 2301 nt7.49□□□□□ -1.21
VBA1Q04301 ADE8YDR408C 645 nt7.49□□□□□ -1.21
VBA1Q04301 EMC3YKL207W 762 nt7.49□□□□□ -1.21
VBA1Q04301 POP2YNR052C 1302 nt7.49□□□□□ -1.21
VBA1Q04301 OPI3YJR073C 621 nt7.48□□□□□ -1.21
VBA1Q04301 YLR072WYLR072W 2082 nt7.47□□□□□ -1.21
VBA1Q04301 ADE16YLR028C 1776 nt7.46□□□□□ -1.21
VBA1Q04301 FTH1YBR207W 1398 nt7.46□□□□□ -1.22
VBA1Q04301 YMR244WYMR244W 1068 nt7.45□□□□□ -1.22
VBA1Q04301 YMC2YBR104W 990 nt7.45□□□□□ -1.22
VBA1Q04301 snR31snR31 225 nt7.45□□□□□ -1.22
VBA1Q04301 THI3YDL080C 1830 nt7.44□□□□□ -1.22
VBA1Q04301 YPI1YFR003C 468 nt7.44□□□□□ -1.22
VBA1Q04301 YMR210WYMR210W 1350 nt7.44□□□□□ -1.22
VBA1Q04301 MET1YKR069W 1782 nt7.43□□□□□ -1.22
VBA1Q04301 SWT21YNL187W 1074 nt7.43□□□□□ -1.22
VBA1Q04301 KGD2YDR148C 1392 nt7.42□□□□□ -1.22
VBA1Q04301 LPD1YFL018C 1500 nt7.42□□□□□ -1.22
VBA1Q04301 YFR036W-AYFR036W-A 651 nt7.41□□□□□ -1.22
VBA1Q04301 YIL177CYIL177C 5277 nt7.41□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms