Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 RIM2YBR192W 1134 nt7.49□□□□□ -1.21
VPS28Q02767 MEX67YPL169C 1800 nt7.48□□□□□ -1.21
VPS28Q02767 KRR1YCL059C 951 nt7.48□□□□□ -1.21
VPS28Q02767 CAB5YDR196C 726 nt7.48□□□□□ -1.21
VPS28Q02767 YFL015W-AYFL015W-A 318 nt7.48□□□□□ -1.21
VPS28Q02767 YJL118WYJL118W 660 nt7.48□□□□□ -1.21
VPS28Q02767 RPC31YNL151C 756 nt7.48□□□□□ -1.21
VPS28Q02767 TPN1YGL186C 1740 nt7.47□□□□□ -1.21
VPS28Q02767 TIP1YBR067C 633 nt7.47□□□□□ -1.21
VPS28Q02767 ERG13YML126C 1476 nt7.47□□□□□ -1.21
VPS28Q02767 TPS1YBR126C 1488 nt7.47□□□□□ -1.21
VPS28Q02767 SAC7YDR389W 1965 nt7.46□□□□□ -1.21
VPS28Q02767 HEM14YER014W 1620 nt7.46□□□□□ -1.21
VPS28Q02767 DPL1YDR294C 1770 nt7.46□□□□□ -1.22
VPS28Q02767 LSM5YER146W 282 nt7.45□□□□□ -1.22
VPS28Q02767 SNX3YOR357C 489 nt7.45□□□□□ -1.22
VPS28Q02767 NBA1YOL070C 1506 nt7.44□□□□□ -1.22
VPS28Q02767 LOT5YKL183W 921 nt7.44□□□□□ -1.22
VPS28Q02767 TOM71YHR117W 1920 nt7.43□□□□□ -1.22
VPS28Q02767 DDI1YER143W 1287 nt7.43□□□□□ -1.22
VPS28Q02767 YLR111WYLR111W 333 nt7.43□□□□□ -1.22
VPS28Q02767 TMA23YMR269W 636 nt7.42□□□□□ -1.22
VPS28Q02767 RRT8YOL048C 1029 nt7.42□□□□□ -1.22
VPS28Q02767 HXT12YIL170W 1374 nt7.42□□□□□ -1.22
VPS28Q02767 INH1YDL181W 258 nt7.41□□□□□ -1.22
VPS28Q02767 YJL055WYJL055W 738 nt7.41□□□□□ -1.22
VPS28Q02767 LPD1YFL018C 1500 nt7.41□□□□□ -1.22
VPS28Q02767 VRG4YGL225W 1014 nt7.4□□□□□ -1.22
VPS28Q02767 YLR437C-AYLR437C-A 228 nt7.4□□□□□ -1.22
VPS28Q02767 LSB3YFR024C-A 1380 nt7.4□□□□□ -1.22
VPS28Q02767 LEU4YNL104C 1860 nt7.39□□□□□ -1.23
VPS28Q02767 RIB7YBR153W 735 nt7.39□□□□□ -1.23
VPS28Q02767 YMR265CYMR265C 1386 nt7.38□□□□□ -1.23
VPS28Q02767 UFD1YGR048W 1086 nt7.38□□□□□ -1.23
VPS28Q02767 ALR1YOL130W 2580 nt7.38□□□□□ -1.23
VPS28Q02767 GAL3YDR009W 1563 nt7.37□□□□□ -1.23
VPS28Q02767 IMO32YGR031W 1029 nt7.37□□□□□ -1.23
VPS28Q02767 DAK2YFL053W 1776 nt7.37□□□□□ -1.23
VPS28Q02767 GLR1YPL091W 1452 nt7.36□□□□□ -1.23
VPS28Q02767 ELO1YJL196C 933 nt7.35□□□□□ -1.23
VPS28Q02767 YNR064CYNR064C 873 nt7.35□□□□□ -1.23
VPS28Q02767 HAP5YOR358W 729 nt7.34□□□□□ -1.23
VPS28Q02767 SFL1YOR140W 2301 nt7.34□□□□□ -1.23
VPS28Q02767 SUV3YPL029W 2214 nt7.33□□□□□ -1.24
VPS28Q02767 tE(CUC)DtE(CUC)D 72 nt7.33□□□□□ -1.24
VPS28Q02767 tE(CUC)ItE(CUC)I 72 nt7.33□□□□□ -1.24
VPS28Q02767 FIT1YDR534C 1587 nt7.33□□□□□ -1.24
VPS28Q02767 FET5YFL041W 1869 nt7.32□□□□□ -1.24
VPS28Q02767 NPP2YEL016C 1482 nt7.32□□□□□ -1.24
VPS28Q02767 RPN14YGL004C 1254 nt7.32□□□□□ -1.24
VPS28Q02767 YJR114WYJR114W 393 nt7.32□□□□□ -1.24
VPS28Q02767 FRA1YLL029W 2250 nt7.31□□□□□ -1.24
VPS28Q02767 ADE8YDR408C 645 nt7.31□□□□□ -1.24
VPS28Q02767 YDR467CYDR467C 327 nt7.31□□□□□ -1.24
VPS28Q02767 YMR226CYMR226C 804 nt7.31□□□□□ -1.24
VPS28Q02767 KEL3YPL263C 1956 nt7.31□□□□□ -1.24
VPS28Q02767 YIL177CYIL177C 5277 nt7.3□□□□□ -1.24
VPS28Q02767 RIB2YOL066C 1776 nt7.3□□□□□ -1.24
VPS28Q02767 tD(GUC)BtD(GUC)B 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)DtD(GUC)D 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)G1tD(GUC)G1 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)G2tD(GUC)G2 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)I1tD(GUC)I1 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)I2tD(GUC)I2 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)J1tD(GUC)J1 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)J2tD(GUC)J2 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)J3tD(GUC)J3 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)J4tD(GUC)J4 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)KtD(GUC)K 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)L1tD(GUC)L1 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)L2tD(GUC)L2 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)MtD(GUC)M 72 nt7.29□□□□□ -1.24
VPS28Q02767 tD(GUC)OtD(GUC)O 72 nt7.29□□□□□ -1.24
VPS28Q02767 OPI3YJR073C 621 nt7.29□□□□□ -1.24
VPS28Q02767 RSC4YKR008W 1878 nt7.28□□□□□ -1.24
VPS28Q02767 YPI1YFR003C 468 nt7.27□□□□□ -1.25
VPS28Q02767 MIM1YOL026C 342 nt7.27□□□□□ -1.25
VPS28Q02767 HBS1YKR084C 1836 nt7.25□□□□□ -1.25
VPS28Q02767 YFR036W-AYFR036W-A 651 nt7.25□□□□□ -1.25
VPS28Q02767 CRC1YOR100C 984 nt7.25□□□□□ -1.25
VPS28Q02767 YRF1-3YGR296W 5580 nt7.25□□□□□ -1.25
VPS28Q02767 YRF1-6YNL339C 5580 nt7.25□□□□□ -1.25
VPS28Q02767 YRF1-7YPL283C 5580 nt7.25□□□□□ -1.25
VPS28Q02767 TVP23YDR084C 600 nt7.24□□□□□ -1.25
VPS28Q02767 NSG2YNL156C 900 nt7.24□□□□□ -1.25
VPS28Q02767 snR31snR31 225 nt7.24□□□□□ -1.25
VPS28Q02767 SWT21YNL187W 1074 nt7.23□□□□□ -1.25
VPS28Q02767 GPM1YKL152C 744 nt7.22□□□□□ -1.25
VPS28Q02767 MET1YKR069W 1782 nt7.21□□□□□ -1.25
VPS28Q02767 YMR244WYMR244W 1068 nt7.21□□□□□ -1.26
VPS28Q02767 YNR029CYNR029C 1290 nt7.21□□□□□ -1.26
VPS28Q02767 YBL095WYBL095W 813 nt7.21□□□□□ -1.26
VPS28Q02767 TRP2YER090W 1524 nt7.21□□□□□ -1.26
VPS28Q02767 HXT11YOL156W 1704 nt7.21□□□□□ -1.26
VPS28Q02767 YPR126CYPR126C 309 nt7.2□□□□□ -1.26
VPS28Q02767 MET30YIL046W 1923 nt7.2□□□□□ -1.26
VPS28Q02767 THI6YPL214C 1623 nt7.19□□□□□ -1.26
VPS28Q02767 DUR3YHL016C 2208 nt7.19□□□□□ -1.26
VPS28Q02767 SNZ1YMR096W 894 nt7.19□□□□□ -1.26
VPS28Q02767 YNL190WYNL190W 615 nt7.19□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms