Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 TAF13YML098W 504 nt9.07□□□□□ -0.96
RFX1P48743 CTI6YPL181W 1521 nt9.06□□□□□ -0.96
RFX1P48743 IML3YBR107C 738 nt9.06□□□□□ -0.96
RFX1P48743 YGR139WYGR139W 339 nt9.05□□□□□ -0.96
RFX1P48743 ENT4YLL038C 744 nt9.05□□□□□ -0.96
RFX1P48743 RRT8YOL048C 1029 nt9.05□□□□□ -0.96
RFX1P48743 URA8YJR103W 1737 nt9.05□□□□□ -0.96
RFX1P48743 YLR046CYLR046C 813 nt9.04□□□□□ -0.96
RFX1P48743 ADE8YDR408C 645 nt9.03□□□□□ -0.96
RFX1P48743 DMA2YNL116W 1569 nt9.03□□□□□ -0.96
RFX1P48743 ZAP1YJL056C 2643 nt9.02□□□□□ -0.96
RFX1P48743 YFR036W-AYFR036W-A 651 nt9.02□□□□□ -0.97
RFX1P48743 MHF1YOL086W-A 273 nt9.02□□□□□ -0.97
RFX1P48743 CYT1YOR065W 930 nt9.02□□□□□ -0.97
RFX1P48743 GID8YMR135C 1368 nt8.99□□□□□ -0.97
RFX1P48743 SPS100YHR139C 981 nt8.99□□□□□ -0.97
RFX1P48743 YJR114WYJR114W 393 nt8.99□□□□□ -0.97
RFX1P48743 POT1YIL160C 1254 nt8.98□□□□□ -0.97
RFX1P48743 YMR262WYMR262W 942 nt8.98□□□□□ -0.97
RFX1P48743 SAC7YDR389W 1965 nt8.97□□□□□ -0.97
RFX1P48743 HXK1YFR053C 1458 nt8.97□□□□□ -0.97
RFX1P48743 ALD5YER073W 1563 nt8.95□□□□□ -0.98
RFX1P48743 tS(GCU)LtS(GCU)L 80 nt8.95□□□□□ -0.98
RFX1P48743 YHR218WYHR218W 1812 nt8.95□□□□□ -0.98
RFX1P48743 DLD3YEL071W 1491 nt8.95□□□□□ -0.98
RFX1P48743 TVP23YDR084C 600 nt8.94□□□□□ -0.98
RFX1P48743 PAU5YFL020C 369 nt8.94□□□□□ -0.98
RFX1P48743 OPI3YJR073C 621 nt8.94□□□□□ -0.98
RFX1P48743 YKL133CYKL133C 1392 nt8.94□□□□□ -0.98
RFX1P48743 MRS6YOR370C 1812 nt8.94□□□□□ -0.98
RFX1P48743 ITR2YOL103W 1830 nt8.93□□□□□ -0.98
RFX1P48743 YHR219WYHR219W 1875 nt8.92□□□□□ -0.98
RFX1P48743 ODC1YPL134C 933 nt8.92□□□□□ -0.98
RFX1P48743 ESS1YJR017C 513 nt8.91□□□□□ -0.98
RFX1P48743 ABZ2YMR289W 1125 nt8.91□□□□□ -0.98
RFX1P48743 YNR064CYNR064C 873 nt8.9□□□□□ -0.98
RFX1P48743 ELO1YJL196C 933 nt8.89□□□□□ -0.99
RFX1P48743 GSF2YML048W 1212 nt8.89□□□□□ -0.99
RFX1P48743 LSR1LSR1 1175 nt8.89□□□□□ -0.99
RFX1P48743 TIP1YBR067C 633 nt8.89□□□□□ -0.99
RFX1P48743 PGC1YPL206C 966 nt8.88□□□□□ -0.99
RFX1P48743 TUB4YLR212C 1422 nt8.88□□□□□ -0.99
RFX1P48743 ENO2YHR174W 1314 nt8.87□□□□□ -0.99
RFX1P48743 NIF3YGL221C 867 nt8.87□□□□□ -0.99
RFX1P48743 APS2YJR058C 444 nt8.87□□□□□ -0.99
RFX1P48743 GID7YCL039W 2238 nt8.86□□□□□ -0.99
RFX1P48743 STP3YLR375W 1032 nt8.86□□□□□ -0.99
RFX1P48743 VMA11YPL234C 495 nt8.84□□□□□ -0.99
RFX1P48743 KEL3YPL263C 1956 nt8.84□□□□□ -0.99
RFX1P48743 RPD3YNL330C 1302 nt8.83□□□□□ -1
RFX1P48743 AMF1YOR378W 1548 nt8.83□□□□□ -1
RFX1P48743 SSL2YIL143C 2532 nt8.83□□□□□ -1
RFX1P48743 KRE1YNL322C 942 nt8.82□□□□□ -1
RFX1P48743 YBR232CYBR232C 360 nt8.81□□□□□ -1
RFX1P48743 TPC1YGR096W 945 nt8.8□□□□□ -1
RFX1P48743 SNX3YOR357C 489 nt8.8□□□□□ -1
RFX1P48743 YMR265CYMR265C 1386 nt8.79□□□□□ -1
RFX1P48743 PCP1YGR101W 1041 nt8.79□□□□□ -1
RFX1P48743 TIM44YIL022W 1296 nt8.79□□□□□ -1
RFX1P48743 HAP5YOR358W 729 nt8.79□□□□□ -1
RFX1P48743 SUV3YPL029W 2214 nt8.78□□□□□ -1
RFX1P48743 YOR072WYOR072W 315 nt8.78□□□□□ -1
RFX1P48743 HXT10YFL011W 1641 nt8.78□□□□□ -1
RFX1P48743 PAR32YDL173W 888 nt8.77□□□□□ -1.01
RFX1P48743 SPE2YOL052C 1191 nt8.77□□□□□ -1.01
RFX1P48743 SFL1YOR140W 2301 nt8.77□□□□□ -1.01
RFX1P48743 RPN14YGL004C 1254 nt8.76□□□□□ -1.01
RFX1P48743 MDM35YKL053C-A 261 nt8.76□□□□□ -1.01
RFX1P48743 SWT21YNL187W 1074 nt8.76□□□□□ -1.01
RFX1P48743 CWP2YKL096W-A 279 nt8.75□□□□□ -1.01
RFX1P48743 snR31snR31 225 nt8.75□□□□□ -1.01
RFX1P48743 MET1YKR069W 1782 nt8.75□□□□□ -1.01
RFX1P48743 NAS2YIL007C 663 nt8.74□□□□□ -1.01
RFX1P48743 SEN2YLR105C 1134 nt8.74□□□□□ -1.01
RFX1P48743 LEU2YCL018W 1095 nt8.74□□□□□ -1.01
RFX1P48743 CRC1YOR100C 984 nt8.73□□□□□ -1.01
RFX1P48743 IGD1YFR017C 588 nt8.72□□□□□ -1.01
RFX1P48743 YKL053WYKL053W 375 nt8.72□□□□□ -1.01
RFX1P48743 MET8YBR213W 825 nt8.71□□□□□ -1.02
RFX1P48743 NAM8YHR086W 1572 nt8.7□□□□□ -1.02
RFX1P48743 GTB1YDR221W 2109 nt8.7□□□□□ -1.02
RFX1P48743 THP3YPR045C 1413 nt8.7□□□□□ -1.02
RFX1P48743 MEX67YPL169C 1800 nt8.69□□□□□ -1.02
RFX1P48743 RPC31YNL151C 756 nt8.69□□□□□ -1.02
RFX1P48743 KRR1YCL059C 951 nt8.68□□□□□ -1.02
RFX1P48743 CDD1YLR245C 429 nt8.68□□□□□ -1.02
RFX1P48743 RIM2YBR192W 1134 nt8.68□□□□□ -1.02
RFX1P48743 MDL2YPL270W 2322 nt8.68□□□□□ -1.02
RFX1P48743 YJL064WYJL064W 396 nt8.67□□□□□ -1.02
RFX1P48743 BSP1YPR171W 1731 nt8.67□□□□□ -1.02
RFX1P48743 FSH2YMR222C 672 nt8.66□□□□□ -1.02
RFX1P48743 NBA1YOL070C 1506 nt8.65□□□□□ -1.02
RFX1P48743 MTO1YGL236C 2010 nt8.65□□□□□ -1.02
RFX1P48743 YKR012CYKR012C 378 nt8.65□□□□□ -1.02
RFX1P48743 NAP1YKR048C 1254 nt8.65□□□□□ -1.02
RFX1P48743 KGD2YDR148C 1392 nt8.64□□□□□ -1.03
RFX1P48743 DPL1YDR294C 1770 nt8.64□□□□□ -1.03
RFX1P48743 AGP3YFL055W 1677 nt8.64□□□□□ -1.03
RFX1P48743 SRP54YPR088C 1626 nt8.63□□□□□ -1.03
RFX1P48743 tA(AGC)DtA(AGC)D 73 nt8.62□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms