Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 YMR114CYMR114C 1107 nt13.42□□□□□ -0.26
YCK3P39962 COA2YPL189C-A 207 nt13.42□□□□□ -0.26
YCK3P39962 RKM2YDR198C 1440 nt13.41□□□□□ -0.26
YCK3P39962 Q0143Q0143 153 nt13.41□□□□□ -0.26
YCK3P39962 CPR7YJR032W 1182 nt13.41□□□□□ -0.26
YCK3P39962 DOM34YNL001W 1161 nt13.41□□□□□ -0.26
YCK3P39962 SSP2YOR242C 1116 nt13.41□□□□□ -0.26
YCK3P39962 ATC1YDR184C 885 nt13.4□□□□□ -0.26
YCK3P39962 ERV41YML067C 1059 nt13.4□□□□□ -0.26
YCK3P39962 YER097WYER097W 330 nt13.39□□□□□ -0.27
YCK3P39962 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
YCK3P39962 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
YCK3P39962 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
YCK3P39962 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
YCK3P39962 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
YCK3P39962 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
YCK3P39962 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
YCK3P39962 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
YCK3P39962 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
YCK3P39962 YIL100C-AYIL100C-A 339 nt13.39□□□□□ -0.27
YCK3P39962 FYV6YNL133C 522 nt13.39□□□□□ -0.27
YCK3P39962 YAP3YHL009C 993 nt13.38□□□□□ -0.27
YCK3P39962 MTR2YKL186C 555 nt13.38□□□□□ -0.27
YCK3P39962 YKR051WYKR051W 1257 nt13.38□□□□□ -0.27
YCK3P39962 ETR1YBR026C 1143 nt13.38□□□□□ -0.27
YCK3P39962 CUP9YPL177C 921 nt13.38□□□□□ -0.27
YCK3P39962 SEC28YIL076W 891 nt13.37□□□□□ -0.27
YCK3P39962 GMH1YKR030W 822 nt13.37□□□□□ -0.27
YCK3P39962 YMR147WYMR147W 672 nt13.37□□□□□ -0.27
YCK3P39962 RPN5YDL147W 1338 nt13.37□□□□□ -0.27
YCK3P39962 UFD1YGR048W 1086 nt13.36□□□□□ -0.27
YCK3P39962 YFT2YDR319C 825 nt13.35□□□□□ -0.27
YCK3P39962 YGL185CYGL185C 1140 nt13.35□□□□□ -0.27
YCK3P39962 TAN1YGL232W 870 nt13.35□□□□□ -0.27
YCK3P39962 YLR379WYLR379W 375 nt13.35□□□□□ -0.27
YCK3P39962 PEX12YMR026C 1200 nt13.35□□□□□ -0.27
YCK3P39962 YMR158W-BYMR158W-B 321 nt13.35□□□□□ -0.27
YCK3P39962 UBS1YBR165W 834 nt13.35□□□□□ -0.27
YCK3P39962 YER186CYER186C 921 nt13.34□□□□□ -0.27
YCK3P39962 YFR020WYFR020W 699 nt13.34□□□□□ -0.27
YCK3P39962 RUF5-1RUF5-1 710 nt13.34□□□□□ -0.27
YCK3P39962 RUF5-2RUF5-2 710 nt13.34□□□□□ -0.27
YCK3P39962 SRL4YPL033C 846 nt13.34□□□□□ -0.27
YCK3P39962 VBA3YCL069W 1377 nt13.33□□□□□ -0.27
YCK3P39962 CDC40YDR364C 1368 nt13.33□□□□□ -0.27
YCK3P39962 PCL5YHR071W 690 nt13.33□□□□□ -0.28
YCK3P39962 PCL1YNL289W 840 nt13.33□□□□□ -0.28
YCK3P39962 RRB1YMR131C 1536 nt13.33□□□□□ -0.28
YCK3P39962 YCR025CYCR025C 411 nt13.32□□□□□ -0.28
YCK3P39962 MMM1YLL006W 1281 nt13.32□□□□□ -0.28
YCK3P39962 YLR334CYLR334C 381 nt13.32□□□□□ -0.28
YCK3P39962 YJR096WYJR096W 849 nt13.31□□□□□ -0.28
YCK3P39962 RIF2YLR453C 1188 nt13.31□□□□□ -0.28
YCK3P39962 PGC1YPL206C 966 nt13.31□□□□□ -0.28
YCK3P39962 CIN2YPL241C 807 nt13.31□□□□□ -0.28
YCK3P39962 YPR147CYPR147C 915 nt13.31□□□□□ -0.28
YCK3P39962 RPP1BYDL130W 321 nt13.3□□□□□ -0.28
YCK3P39962 SPO11YHL022C 1197 nt13.3□□□□□ -0.28
YCK3P39962 MIR1YJR077C 936 nt13.3□□□□□ -0.28
YCK3P39962 MFT1YML062C 1179 nt13.3□□□□□ -0.28
YCK3P39962 PRE7YBL041W 726 nt13.3□□□□□ -0.28
YCK3P39962 MRPS8YMR158W 468 nt13.3□□□□□ -0.28
YCK3P39962 RRI1YDL216C 1323 nt13.3□□□□□ -0.28
YCK3P39962 MRF1YGL143C 1242 nt13.29□□□□□ -0.28
YCK3P39962 CHS7YHR142W 951 nt13.29□□□□□ -0.28
YCK3P39962 PKP1YIL042C 1185 nt13.29□□□□□ -0.28
YCK3P39962 YCL049CYCL049C 939 nt13.29□□□□□ -0.28
YCK3P39962 YLR046CYLR046C 813 nt13.28□□□□□ -0.28
YCK3P39962 MDM12YOL009C 816 nt13.28□□□□□ -0.28
YCK3P39962 YOL038C-AYOL038C-A 96 nt13.28□□□□□ -0.28
YCK3P39962 YLR271WYLR271W 825 nt13.27□□□□□ -0.29
YCK3P39962 RRT5YFR032C 870 nt13.26□□□□□ -0.29
YCK3P39962 YMR010WYMR010W 1218 nt13.26□□□□□ -0.29
YCK3P39962 YPR197CYPR197C 564 nt13.26□□□□□ -0.29
YCK3P39962 FAF1YIL019W 1041 nt13.25□□□□□ -0.29
YCK3P39962 YKL091CYKL091C 933 nt13.25□□□□□ -0.29
YCK3P39962 MFM1YPL060W 1242 nt13.25□□□□□ -0.29
YCK3P39962 PEA2YER149C 1263 nt13.24□□□□□ -0.29
YCK3P39962 GID8YMR135C 1368 nt13.23□□□□□ -0.29
YCK3P39962 PBP2YBR233W 1242 nt13.23□□□□□ -0.29
YCK3P39962 YCL041CYCL041C 495 nt13.23□□□□□ -0.29
YCK3P39962 AIM36YMR157C 768 nt13.22□□□□□ -0.29
YCK3P39962 HLJ1YMR161W 675 nt13.22□□□□□ -0.29
YCK3P39962 YBL070CYBL070C 321 nt13.22□□□□□ -0.29
YCK3P39962 YOL037CYOL037C 354 nt13.22□□□□□ -0.29
YCK3P39962 YLR042CYLR042C 486 nt13.21□□□□□ -0.29
YCK3P39962 FIG1YBR040W 897 nt13.21□□□□□ -0.29
YCK3P39962 YDR445CYDR445C 408 nt13.2□□□□□ -0.3
YCK3P39962 GLC7YER133W 939 nt13.2□□□□□ -0.3
YCK3P39962 YIL082WYIL082W 873 nt13.2□□□□□ -0.3
YCK3P39962 SAW1YAL027W 786 nt13.2□□□□□ -0.3
YCK3P39962 SHE1YBL031W 1017 nt13.2□□□□□ -0.3
YCK3P39962 PPA2YMR267W 933 nt13.2□□□□□ -0.3
YCK3P39962 SPS4YOR313C 1017 nt13.2□□□□□ -0.3
YCK3P39962 MED2YDL005C 1296 nt13.19□□□□□ -0.3
YCK3P39962 RTR1YER139C 681 nt13.19□□□□□ -0.3
YCK3P39962 LYS12YIL094C 1116 nt13.19□□□□□ -0.3
YCK3P39962 YIL115W-AYIL115W-A 372 nt13.19□□□□□ -0.3
YCK3P39962 AIM23YJL131C 1071 nt13.19□□□□□ -0.3
YCK3P39962 RUB1YDR139C 234 nt13.18□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms