Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 ITR2YOL103W 1830 nt8.68□□□□□ -1.02
TDA11P38854 FUN14YAL008W 597 nt8.68□□□□□ -1.02
TDA11P38854 ENT4YLL038C 744 nt8.68□□□□□ -1.02
TDA11P38854 YER188WYER188W 720 nt8.67□□□□□ -1.02
TDA11P38854 STE4YOR212W 1272 nt8.67□□□□□ -1.02
TDA11P38854 DUR3YHL016C 2208 nt8.66□□□□□ -1.02
TDA11P38854 LEU4YNL104C 1860 nt8.66□□□□□ -1.02
TDA11P38854 VMA11YPL234C 495 nt8.66□□□□□ -1.02
TDA11P38854 TAT2YOL020W 1779 nt8.66□□□□□ -1.02
TDA11P38854 FUB1YCR076C 753 nt8.65□□□□□ -1.02
TDA11P38854 LSM5YER146W 282 nt8.65□□□□□ -1.02
TDA11P38854 GAL2YLR081W 1725 nt8.65□□□□□ -1.03
TDA11P38854 OSH7YHR001W 1314 nt8.64□□□□□ -1.03
TDA11P38854 KRR1YCL059C 951 nt8.64□□□□□ -1.03
TDA11P38854 ADH1YOL086C 1047 nt8.64□□□□□ -1.03
TDA11P38854 YPL222C-AYPL222C-A 246 nt8.64□□□□□ -1.03
TDA11P38854 BNI5YNL166C 1347 nt8.63□□□□□ -1.03
TDA11P38854 YJL195CYJL195C 702 nt8.63□□□□□ -1.03
TDA11P38854 LSB5YCL034W 1065 nt8.63□□□□□ -1.03
TDA11P38854 YPI1YFR003C 468 nt8.62□□□□□ -1.03
TDA11P38854 YNR029CYNR029C 1290 nt8.62□□□□□ -1.03
TDA11P38854 MSC1YML128C 1542 nt8.62□□□□□ -1.03
TDA11P38854 DUS3YLR401C 2007 nt8.61□□□□□ -1.03
TDA11P38854 ESBP6YNL125C 2022 nt8.61□□□□□ -1.03
TDA11P38854 NPP2YEL016C 1482 nt8.61□□□□□ -1.03
TDA11P38854 GND1YHR183W 1470 nt8.61□□□□□ -1.03
TDA11P38854 LPD1YFL018C 1500 nt8.6□□□□□ -1.03
TDA11P38854 SNX3YOR357C 489 nt8.59□□□□□ -1.03
TDA11P38854 TIP1YBR067C 633 nt8.59□□□□□ -1.03
TDA11P38854 FRE6YLL051C 2139 nt8.58□□□□□ -1.04
TDA11P38854 ASP3-1YLR155C 1089 nt8.56□□□□□ -1.04
TDA11P38854 ASP3-2YLR157C 1089 nt8.56□□□□□ -1.04
TDA11P38854 ASP3-3YLR158C 1089 nt8.56□□□□□ -1.04
TDA11P38854 ASP3-4YLR160C 1089 nt8.56□□□□□ -1.04
TDA11P38854 ORT1YOR130C 879 nt8.56□□□□□ -1.04
TDA11P38854 TOK1YJL093C 2076 nt8.56□□□□□ -1.04
TDA11P38854 LOT5YKL183W 921 nt8.55□□□□□ -1.04
TDA11P38854 FCY21YER060W 1587 nt8.54□□□□□ -1.04
TDA11P38854 SOL2YCR073W-A 948 nt8.54□□□□□ -1.04
TDA11P38854 tE(CUC)DtE(CUC)D 72 nt8.54□□□□□ -1.04
TDA11P38854 tE(CUC)ItE(CUC)I 72 nt8.54□□□□□ -1.04
TDA11P38854 GPN2YOR262W 1044 nt8.54□□□□□ -1.04
TDA11P38854 HXT11YOL156W 1704 nt8.54□□□□□ -1.04
TDA11P38854 TRP2YER090W 1524 nt8.54□□□□□ -1.04
TDA11P38854 POP2YNR052C 1302 nt8.54□□□□□ -1.04
TDA11P38854 YEL008WYEL008W 381 nt8.53□□□□□ -1.04
TDA11P38854 ADH7YCR105W 1086 nt8.52□□□□□ -1.05
TDA11P38854 snR4snR4 186 nt8.52□□□□□ -1.05
TDA11P38854 YDR467CYDR467C 327 nt8.5□□□□□ -1.05
TDA11P38854 THI6YPL214C 1623 nt8.5□□□□□ -1.05
TDA11P38854 RFC1YOR217W 2586 nt8.49□□□□□ -1.05
TDA11P38854 YDR455CYDR455C 309 nt8.49□□□□□ -1.05
TDA11P38854 ADE16YLR028C 1776 nt8.48□□□□□ -1.05
TDA11P38854 PAU15YIR041W 375 nt8.48□□□□□ -1.05
TDA11P38854 ALR1YOL130W 2580 nt8.47□□□□□ -1.05
TDA11P38854 APT2YDR441C 546 nt8.47□□□□□ -1.05
TDA11P38854 RAS2YNL098C 969 nt8.47□□□□□ -1.05
TDA11P38854 SMM1YNR015W 1155 nt8.47□□□□□ -1.05
TDA11P38854 SRM1YGL097W 1449 nt8.46□□□□□ -1.05
TDA11P38854 SAC7YDR389W 1965 nt8.46□□□□□ -1.06
TDA11P38854 TPN1YGL186C 1740 nt8.46□□□□□ -1.06
TDA11P38854 HXT12YIL170W 1374 nt8.45□□□□□ -1.06
TDA11P38854 DTR1YBR180W 1719 nt8.44□□□□□ -1.06
TDA11P38854 CPD1YGR247W 720 nt8.44□□□□□ -1.06
TDA11P38854 CSM1YCR086W 573 nt8.42□□□□□ -1.06
TDA11P38854 ESS1YJR017C 513 nt8.42□□□□□ -1.06
TDA11P38854 LSB3YFR024C-A 1380 nt8.42□□□□□ -1.06
TDA11P38854 MET30YIL046W 1923 nt8.41□□□□□ -1.06
TDA11P38854 YMR265CYMR265C 1386 nt8.41□□□□□ -1.06
TDA11P38854 NUC1YJL208C 990 nt8.41□□□□□ -1.06
TDA11P38854 ERG13YML126C 1476 nt8.4□□□□□ -1.06
TDA11P38854 FTH1YBR207W 1398 nt8.4□□□□□ -1.06
TDA11P38854 EMC3YKL207W 762 nt8.4□□□□□ -1.06
TDA11P38854 PFS2YNL317W 1398 nt8.39□□□□□ -1.07
TDA11P38854 YNL190WYNL190W 615 nt8.39□□□□□ -1.07
TDA11P38854 RIB2YOL066C 1776 nt8.38□□□□□ -1.07
TDA11P38854 PRY1YJL079C 900 nt8.38□□□□□ -1.07
TDA11P38854 EAF3YPR023C 1206 nt8.38□□□□□ -1.07
TDA11P38854 YBL095WYBL095W 813 nt8.37□□□□□ -1.07
TDA11P38854 AAT1YKL106W 1356 nt8.36□□□□□ -1.07
TDA11P38854 YLR072WYLR072W 2082 nt8.36□□□□□ -1.07
TDA11P38854 LAS17YOR181W 1902 nt8.36□□□□□ -1.07
TDA11P38854 SAM3YPL274W 1764 nt8.35□□□□□ -1.07
TDA11P38854 HSV2YGR223C 1347 nt8.35□□□□□ -1.07
TDA11P38854 DIA4YHR011W 1341 nt8.35□□□□□ -1.07
TDA11P38854 ELO1YJL196C 933 nt8.35□□□□□ -1.07
TDA11P38854 HAP5YOR358W 729 nt8.35□□□□□ -1.07
TDA11P38854 SUV3YPL029W 2214 nt8.35□□□□□ -1.07
TDA11P38854 GPM1YKL152C 744 nt8.34□□□□□ -1.07
TDA11P38854 YMR210WYMR210W 1350 nt8.34□□□□□ -1.07
TDA11P38854 YRF1-1YDR545W 5391 nt8.34□□□□□ -1.08
TDA11P38854 YRF1-5YLR467W 5391 nt8.34□□□□□ -1.08
TDA11P38854 YRF1-8YOR396W 5391 nt8.34□□□□□ -1.08
TDA11P38854 TOM71YHR117W 1920 nt8.33□□□□□ -1.08
TDA11P38854 OYE2YHR179W 1203 nt8.33□□□□□ -1.08
TDA11P38854 RPN14YGL004C 1254 nt8.32□□□□□ -1.08
TDA11P38854 tS(GCU)LtS(GCU)L 80 nt8.31□□□□□ -1.08
TDA11P38854 VRG4YGL225W 1014 nt8.3□□□□□ -1.08
TDA11P38854 MDH2YOL126C 1134 nt8.3□□□□□ -1.08
TDA11P38854 SFL1YOR140W 2301 nt8.29□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms