Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.253e-10■■■■■ 47.4
TROVE2P10155 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.243e-10■■■■■ 47.4
TROVE2P10155 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.233e-10■■■■■ 47.4
TROVE2P10155 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.193e-10■■■■■ 47.4
TROVE2P10155 Y_RNA.530-201ENST00000384587 101 ntBASIC0.71□□□□□ -2.33e-10■■■■■ 47.4
TROVE2P10155 Y_RNA.2-201ENST00000362330 96 ntBASIC0.56□□□□□ -2.323e-10■■■■■ 47.4
TROVE2P10155 Y_RNA.621-201ENST00000411065 96 ntBASIC0.55□□□□□ -2.323e-10■■■■■ 47.4
TROVE2P10155 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.1□□□□□ -2.433e-10■■■■■ 47.4
TROVE2P10155 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.418e-74■■■■■ 47.3
TROVE2P10155 SLC25A5-202ENST00000460013 775 ntTSL 311.19□□□□□ -0.628e-74■■■■■ 47.3
TROVE2P10155 SLC25A5-204ENST00000475354 483 ntTSL 510.21□□□□□ -0.778e-74■■■■■ 47.3
TROVE2P10155 CLTA-205ENST00000464497 1890 ntTSL 518.87■□□□□ 0.616e-15■■■■■ 46.9
TROVE2P10155 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.27□□□□□ -2.612e-8■■■■■ 46.7
TROVE2P10155 Y_RNA.605-201ENST00000410577 105 ntBASIC0.31□□□□□ -2.361e-12■■■■■ 46.7
TROVE2P10155 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.322e-8■■■■■ 46.5
TROVE2P10155 COG4-203ENST00000482252 2953 ntTSL 211.75□□□□□ -0.532e-8■■■■■ 46.5
TROVE2P10155 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.552e-8■■■■■ 46.5
TROVE2P10155 COG4-205ENST00000526700 1978 ntTSL 511.27□□□□□ -0.612e-8■■■■■ 46.5
TROVE2P10155 COG4-207ENST00000530314 3488 ntTSL 1 (best)11.03□□□□□ -0.642e-8■■■■■ 46.5
TROVE2P10155 COG4-211ENST00000564415 3000 ntTSL 510.93□□□□□ -0.662e-8■■■■■ 46.5
TROVE2P10155 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.283e-10■■■■■ 46.5
TROVE2P10155 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.253e-10■■■■■ 46.5
TROVE2P10155 MIR30D-201ENST00000362283 70 ntBASIC0.02□□□□□ -2.413e-10■■■■■ 46.5
TROVE2P10155 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.233e-18■■■■■ 46.5
TROVE2P10155 ZNF280D-209ENST00000559446 1409 ntTSL 1 (best)5.6□□□□□ -1.513e-18■■■■■ 46.5
TROVE2P10155 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.993e-18■■■■■ 46.5
TROVE2P10155 ZNF280D-203ENST00000558067 3528 ntTSL 21.89□□□□□ -2.113e-18■■■■■ 46.5
TROVE2P10155 ZNF280D-206ENST00000559182 587 ntTSL 40.88□□□□□ -2.273e-18■■■■■ 46.5
TROVE2P10155 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.12□□□□□ -2.433e-18■■■■■ 46.5
TROVE2P10155 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.565e-6■■■■■ 46.1
TROVE2P10155 NOL4-212ENST00000590712 1930 ntTSL 218.51■□□□□ 0.555e-6■■■■■ 46.1
TROVE2P10155 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.995e-6■■■■■ 46.1
TROVE2P10155 NOL4-205ENST00000586314 2193 ntTSL 27.69□□□□□ -1.185e-6■■■■■ 46.1
TROVE2P10155 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.43□□□□□ -1.385e-6■■■■■ 46.1
TROVE2P10155 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.02□□□□□ -1.445e-6■■■■■ 46.1
TROVE2P10155 NOL4-206ENST00000586553 838 ntTSL 53.73□□□□□ -1.815e-6■■■■■ 46.1
TROVE2P10155 Y_RNA.5-201ENST00000362334 102 ntBASIC0.03□□□□□ -2.45e-6■■■■■ 46.1
TROVE2P10155 DENND5B-206ENST00000545147 566 ntTSL 219.53■□□□□ 0.726e-18■■■■■ 45.8
TROVE2P10155 DENND5B-205ENST00000544698 643 ntTSL 319.07■□□□□ 0.646e-18■■■■■ 45.8
TROVE2P10155 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.47■□□□□ 0.556e-18■■■■■ 45.8
TROVE2P10155 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.246e-18■■■■■ 45.8
TROVE2P10155 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC10.35□□□□□ -0.756e-18■■■■■ 45.8
TROVE2P10155 Y_RNA.231-201ENST00000364358 102 ntBASIC0.86□□□□□ -2.276e-18■■■■■ 45.8
TROVE2P10155 MRPS14-201ENST00000367677 910 ntTSL 1 (best)12.42□□□□□ -0.428e-10■■■■■ 45.1
TROVE2P10155 MRPS14-202ENST00000476371 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.618e-10■■■■■ 45.1
TROVE2P10155 VPS13B-206ENST00000496144 5625 ntTSL 58.5□□□□□ -1.058e-10■■■■■ 45.1
TROVE2P10155 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.248e-10■■■■■ 45.1
TROVE2P10155 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.338e-10■■■■■ 45.1
TROVE2P10155 VPS13B-209ENST00000521559 466 ntTSL 32.83□□□□□ -1.968e-10■■■■■ 45.1
TROVE2P10155 Y_RNA.402-201ENST00000383972 102 ntBASIC0.59□□□□□ -2.318e-10■■■■■ 45.1
TROVE2P10155 Y_RNA.364-201ENST00000365532 101 ntBASIC0.57□□□□□ -2.328e-10■■■■■ 45.1
TROVE2P10155 Y_RNA.390-201ENST00000383932 102 ntBASIC0□□□□□ -2.418e-10■■■■■ 45.1
TROVE2P10155 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.92□□□□□ -2.568e-10■■■■■ 45.1
TROVE2P10155 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.62■□□□□ 0.736e-11■■■■■ 44.7
TROVE2P10155 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.66e-11■■■■■ 44.7
TROVE2P10155 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.91□□□□□ -0.026e-11■■■■■ 44.7
TROVE2P10155 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.416e-11■■■■■ 44.7
TROVE2P10155 Y_RNA.418-201ENST00000384029 102 ntBASIC0.05□□□□□ -2.46e-11■■■■■ 44.7
TROVE2P10155 DEPDC4-202ENST00000378244 2337 ntTSL 210.89□□□□□ -0.672e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.812e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-207ENST00000549249 1003 ntTSL 1 (best)7.85□□□□□ -1.152e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-208ENST00000549341 541 ntTSL 1 (best)6.99□□□□□ -1.292e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-201ENST00000299185 768 ntTSL 1 (best)6.11□□□□□ -1.432e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-209ENST00000550587 1165 ntAPPRIS ALT2 TSL 1 (best)5.97□□□□□ -1.452e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-210ENST00000551642 1033 ntAPPRIS ALT2 TSL 1 (best)5.95□□□□□ -1.462e-8■■■■■ 44.5
TROVE2P10155 DEPDC4-205ENST00000548313 389 ntTSL 32.16□□□□□ -2.062e-8■■■■■ 44.5
TROVE2P10155 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.03□□□□□ -2.412e-8■■■■■ 44.5
TROVE2P10155 MCM4-210ENST00000520934 621 ntTSL 322.12■■□□□ 1.138e-33■■■■■ 44.3
TROVE2P10155 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.288e-33■■■■■ 44.3
TROVE2P10155 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.218e-33■■■■■ 44.3
TROVE2P10155 MCM4-206ENST00000519138 927 ntTSL 210.87□□□□□ -0.678e-33■■■■■ 44.3
TROVE2P10155 MCM4-216ENST00000524086 547 ntTSL 510.76□□□□□ -0.698e-33■■■■■ 44.3
TROVE2P10155 MCM4-203ENST00000518221 572 ntTSL 410.55□□□□□ -0.728e-33■■■■■ 44.3
TROVE2P10155 MCM4-207ENST00000519170 734 ntTSL 310.14□□□□□ -0.798e-33■■■■■ 44.3
TROVE2P10155 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.381e-20■■■■■ 44.3
TROVE2P10155 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.688e-10■■■■■ 42.7
TROVE2P10155 HBG2-202ENST00000380252 694 ntTSL 3 BASIC9.44□□□□□ -0.98e-10■■■■■ 42.7
TROVE2P10155 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.988e-10■■■■■ 42.7
TROVE2P10155 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.75□□□□□ -1.338e-10■■■■■ 42.7
TROVE2P10155 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.3■□□□□ 0.522e-7■■■■■ 42
TROVE2P10155 LINC00466-209ENST00000635458 1554 ntTSL 517.09■□□□□ 0.332e-7■■■■■ 42
TROVE2P10155 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.76□□□□□ -0.052e-7■■■■■ 42
TROVE2P10155 LINC00466-210ENST00000635555 1016 ntTSL 57.86□□□□□ -1.152e-7■■■■■ 42
TROVE2P10155 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.09□□□□□ -1.272e-7■■■■■ 42
TROVE2P10155 LINC00466-204ENST00000447183 785 ntTSL 54.35□□□□□ -1.712e-7■■■■■ 42
TROVE2P10155 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.82■□□□□ 0.286e-33■■■■■ 42
TROVE2P10155 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.286e-33■■■■■ 42
TROVE2P10155 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.236e-33■■■■■ 42
TROVE2P10155 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.38■□□□□ 0.216e-33■■■■■ 42
TROVE2P10155 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.076e-33■■■■■ 42
TROVE2P10155 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.056e-33■■■■■ 42
TROVE2P10155 OPA1-214ENST00000482865 567 ntTSL 43.05□□□□□ -1.926e-33■■■■■ 42
TROVE2P10155 Y_RNA.259-201ENST00000364619 101 ntBASIC0.1□□□□□ -2.392e-8■■■■■ 41.8
TROVE2P10155 AP000781.2-203ENST00000528835 533 ntTSL 315.11■□□□□ 0.014e-11■■■■■ 41.7
TROVE2P10155 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC8.8□□□□□ -14e-11■■■■■ 41.7
TROVE2P10155 NMT1-205ENST00000587120 573 ntTSL 514.43□□□□□ -0.12e-9■■■■■ 41.7
TROVE2P10155 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.862e-8■■■■■ 40.7
TROVE2P10155 TOP2A-204ENST00000578412 882 ntTSL 23.1□□□□□ -1.912e-8■■■■■ 40.7
TROVE2P10155 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.24□□□□□ -2.452e-8■■■■■ 40.7
TROVE2P10155 HMCN1-204ENST00000485744 1884 ntTSL 29.79□□□□□ -0.848e-9■■■■■ 40.6
Retrieved 100 of 4,203 protein–RNA pairs in 195.3 ms