RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
HMCN1-204ENST00000485744 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
HMCN1-204ENST00000485744 ABCC9O60706 1549 aa20.65■□□□□ 0.9
HMCN1-204ENST00000485744 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
HMCN1-204ENST00000485744 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
HMCN1-204ENST00000485744 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
HMCN1-204ENST00000485744 NACADO15069 1562 aa19.99■□□□□ 0.79
HMCN1-204ENST00000485744 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
HMCN1-204ENST00000485744 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
HMCN1-204ENST00000485744 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
HMCN1-204ENST00000485744 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
HMCN1-204ENST00000485744 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
HMCN1-204ENST00000485744 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
HMCN1-204ENST00000485744 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
HMCN1-204ENST00000485744 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
HMCN1-204ENST00000485744 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
HMCN1-204ENST00000485744 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
HMCN1-204ENST00000485744 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
HMCN1-204ENST00000485744 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
HMCN1-204ENST00000485744 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
HMCN1-204ENST00000485744 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
HMCN1-204ENST00000485744 WIZO95785 1651 aa18.65■□□□□ 0.58
HMCN1-204ENST00000485744 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
HMCN1-204ENST00000485744 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
HMCN1-204ENST00000485744 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
HMCN1-204ENST00000485744 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
HMCN1-204ENST00000485744 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
HMCN1-204ENST00000485744 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
HMCN1-204ENST00000485744 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
HMCN1-204ENST00000485744 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
HMCN1-204ENST00000485744 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
HMCN1-204ENST00000485744 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
HMCN1-204ENST00000485744 NESP48681 1621 aa18.02■□□□□ 0.47
HMCN1-204ENST00000485744 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
HMCN1-204ENST00000485744 CFTRP13569 1480 aa17.94■□□□□ 0.46
HMCN1-204ENST00000485744 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
HMCN1-204ENST00000485744 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
HMCN1-204ENST00000485744 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
HMCN1-204ENST00000485744 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
HMCN1-204ENST00000485744 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
HMCN1-204ENST00000485744 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
HMCN1-204ENST00000485744 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
HMCN1-204ENST00000485744 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
HMCN1-204ENST00000485744 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
HMCN1-204ENST00000485744 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
HMCN1-204ENST00000485744 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
HMCN1-204ENST00000485744 CUX1P39880 1505 aa17.6■□□□□ 0.41
HMCN1-204ENST00000485744 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.412e-86■■■■■ 321.1
HMCN1-204ENST00000485744 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
HMCN1-204ENST00000485744 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
HMCN1-204ENST00000485744 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
HMCN1-204ENST00000485744 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
HMCN1-204ENST00000485744 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
HMCN1-204ENST00000485744 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
HMCN1-204ENST00000485744 WDR62O43379 1518 aa17.52■□□□□ 0.4
HMCN1-204ENST00000485744 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
HMCN1-204ENST00000485744 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
HMCN1-204ENST00000485744 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
HMCN1-204ENST00000485744 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
HMCN1-204ENST00000485744 CUX2O14529 1486 aa17.39■□□□□ 0.37
HMCN1-204ENST00000485744 SOGA1O94964 1423 aa17.35■□□□□ 0.37
HMCN1-204ENST00000485744 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
HMCN1-204ENST00000485744 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
HMCN1-204ENST00000485744 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
HMCN1-204ENST00000485744 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
HMCN1-204ENST00000485744 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.35
HMCN1-204ENST00000485744 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.35
HMCN1-204ENST00000485744 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
HMCN1-204ENST00000485744 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.35
HMCN1-204ENST00000485744 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
HMCN1-204ENST00000485744 FAM9AQ8IZU1 332 aaPredicted RBP17.21■□□□□ 0.35
HMCN1-204ENST00000485744 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
HMCN1-204ENST00000485744 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
HMCN1-204ENST00000485744 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
HMCN1-204ENST00000485744 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
HMCN1-204ENST00000485744 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
HMCN1-204ENST00000485744 IGF1RP08069 1367 aa17.08■□□□□ 0.32
HMCN1-204ENST00000485744 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
HMCN1-204ENST00000485744 EEA1Q15075 1411 aa17.05■□□□□ 0.32
HMCN1-204ENST00000485744 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
HMCN1-204ENST00000485744 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
HMCN1-204ENST00000485744 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
HMCN1-204ENST00000485744 ADAMTS12P58397 1594 aa17■□□□□ 0.31
HMCN1-204ENST00000485744 CUL7Q14999 1698 aa17■□□□□ 0.31
HMCN1-204ENST00000485744 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
HMCN1-204ENST00000485744 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
HMCN1-204ENST00000485744 CHD1O14646 1710 aa16.96■□□□□ 0.31
HMCN1-204ENST00000485744 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
HMCN1-204ENST00000485744 FBLN2P98095 1184 aa16.95■□□□□ 0.3
HMCN1-204ENST00000485744 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
HMCN1-204ENST00000485744 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
HMCN1-204ENST00000485744 KIF21BO75037 1637 aa16.93■□□□□ 0.3
HMCN1-204ENST00000485744 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
HMCN1-204ENST00000485744 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
HMCN1-204ENST00000485744 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
HMCN1-204ENST00000485744 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
HMCN1-204ENST00000485744 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
HMCN1-204ENST00000485744 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
HMCN1-204ENST00000485744 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
HMCN1-204ENST00000485744 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms