RNA–Protein interactions for RNA: ENST00000464497.5

CLTA-205, Transcript of clathrin light chain A, humanhuman

TSL 5

Gene CLTA, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-205ENST00000464497 NISCHQ9Y2I1 1504 aa38.18■■■■□ 3.7
CLTA-205ENST00000464497 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
CLTA-205ENST00000464497 ABCC9O60706 1549 aa33.89■■■■□ 3.02
CLTA-205ENST00000464497 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
CLTA-205ENST00000464497 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
CLTA-205ENST00000464497 NACADO15069 1562 aa32.12■■■□□ 2.73
CLTA-205ENST00000464497 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
CLTA-205ENST00000464497 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
CLTA-205ENST00000464497 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
CLTA-205ENST00000464497 PABPN1Q86U42 306 aaKnown RBP eCLIP31.67■■■□□ 2.66
CLTA-205ENST00000464497 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
CLTA-205ENST00000464497 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
CLTA-205ENST00000464497 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
CLTA-205ENST00000464497 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.62
CLTA-205ENST00000464497 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
CLTA-205ENST00000464497 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
CLTA-205ENST00000464497 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
CLTA-205ENST00000464497 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
CLTA-205ENST00000464497 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
CLTA-205ENST00000464497 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.46
CLTA-205ENST00000464497 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
CLTA-205ENST00000464497 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
CLTA-205ENST00000464497 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
CLTA-205ENST00000464497 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
CLTA-205ENST00000464497 BAZ1AQ9NRL2 1556 aaPredicted RBP29.58■■■□□ 2.33
CLTA-205ENST00000464497 SMARCA2P51531 1590 aa29.55■■■□□ 2.32
CLTA-205ENST00000464497 HRCP23327 699 aa29.54■■■□□ 2.32
CLTA-205ENST00000464497 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
CLTA-205ENST00000464497 HMGXB3Q12766 1538 aa29.45■■■□□ 2.3
CLTA-205ENST00000464497 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
CLTA-205ENST00000464497 BAZ1BQ9UIG0 1483 aaKnown RBP29.4■■■□□ 2.3
CLTA-205ENST00000464497 PCGF6Q9BYE7 350 aa29.37■■■□□ 2.29
CLTA-205ENST00000464497 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
CLTA-205ENST00000464497 NESP48681 1621 aa29.22■■■□□ 2.27
CLTA-205ENST00000464497 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
CLTA-205ENST00000464497 ERCC6Q03468 1493 aa29.18■■■□□ 2.26
CLTA-205ENST00000464497 WIZO95785 1651 aa29.15■■■□□ 2.26
CLTA-205ENST00000464497 TRIM26Q12899 539 aaPredicted RBP29.04■■■□□ 2.24
CLTA-205ENST00000464497 CUX2O14529 1486 aa28.95■■■□□ 2.22
CLTA-205ENST00000464497 LAMC3Q9Y6N6 1575 aa28.93■■■□□ 2.22
CLTA-205ENST00000464497 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
CLTA-205ENST00000464497 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
CLTA-205ENST00000464497 KIF21AQ7Z4S6 1674 aa28.79■■■□□ 2.2
CLTA-205ENST00000464497 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
CLTA-205ENST00000464497 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
CLTA-205ENST00000464497 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
CLTA-205ENST00000464497 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
CLTA-205ENST00000464497 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
CLTA-205ENST00000464497 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
CLTA-205ENST00000464497 CFTRP13569 1480 aa28.55■■■□□ 2.16
CLTA-205ENST00000464497 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
CLTA-205ENST00000464497 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
CLTA-205ENST00000464497 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
CLTA-205ENST00000464497 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
CLTA-205ENST00000464497 WDR62O43379 1518 aa28.43■■■□□ 2.14
CLTA-205ENST00000464497 ABCC8Q09428 1581 aa28.39■■■□□ 2.14
CLTA-205ENST00000464497 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
CLTA-205ENST00000464497 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
CLTA-205ENST00000464497 EEA1Q15075 1411 aa28.27■■■□□ 2.12
CLTA-205ENST00000464497 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
CLTA-205ENST00000464497 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
CLTA-205ENST00000464497 SOGA1O94964 1423 aa28.13■■■□□ 2.09
CLTA-205ENST00000464497 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
CLTA-205ENST00000464497 CEP162Q5TB80 1403 aa28.05■■■□□ 2.08
CLTA-205ENST00000464497 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
CLTA-205ENST00000464497 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
CLTA-205ENST00000464497 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
CLTA-205ENST00000464497 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
CLTA-205ENST00000464497 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
CLTA-205ENST00000464497 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
CLTA-205ENST00000464497 SYNJ1O43426 1573 aa27.89■■■□□ 2.06
CLTA-205ENST00000464497 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
CLTA-205ENST00000464497 KIF21BO75037 1637 aa27.84■■■□□ 2.05
CLTA-205ENST00000464497 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
CLTA-205ENST00000464497 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
CLTA-205ENST00000464497 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
CLTA-205ENST00000464497 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
CLTA-205ENST00000464497 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
CLTA-205ENST00000464497 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.03
CLTA-205ENST00000464497 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
CLTA-205ENST00000464497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
CLTA-205ENST00000464497 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
CLTA-205ENST00000464497 CUX1P39880 1505 aa27.66■■■□□ 2.02
CLTA-205ENST00000464497 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
CLTA-205ENST00000464497 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
CLTA-205ENST00000464497 BIVM-ERCC5R4GMW8 1640 aa27.6■■■□□ 2.01
CLTA-205ENST00000464497 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
CLTA-205ENST00000464497 CLIP1P30622 1438 aa27.56■■■□□ 2
CLTA-205ENST00000464497 FBLN2P98095 1184 aa27.49■■□□□ 1.99
CLTA-205ENST00000464497 RAPGEF2Q9Y4G8 1499 aa27.49■■□□□ 1.99
CLTA-205ENST00000464497 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
CLTA-205ENST00000464497 CHD1O14646 1710 aa27.45■■□□□ 1.98
CLTA-205ENST00000464497 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
CLTA-205ENST00000464497 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
CLTA-205ENST00000464497 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
CLTA-205ENST00000464497 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
CLTA-205ENST00000464497 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
CLTA-205ENST00000464497 RIMBP3CA6NJZ7 1639 aa27.36■■□□□ 1.97
CLTA-205ENST00000464497 RIMBP3BA6NNM3 1639 aa27.36■■□□□ 1.97
CLTA-205ENST00000464497 RIMBP3Q9UFD9 1639 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms