RNA–Protein interactions for RNA: ENST00000544698.1

DENND5B-205, Transcript of DENN domain containing 5B, humanhuman

TSL 3

Gene DENND5B, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND5B-205ENST00000544698 NISCHQ9Y2I1 1504 aa53.27■■■■■ 6.12
DENND5B-205ENST00000544698 CCDC180Q9P1Z9 1646 aa47.6■■■■■ 5.21
DENND5B-205ENST00000544698 ABCC9O60706 1549 aa47.15■■■■■ 5.14
DENND5B-205ENST00000544698 RB1CC1Q8TDY2 1594 aa45.07■■■■■ 4.8
DENND5B-205ENST00000544698 DCAF8L2P0C7V8 631 aa44.96■■■■■ 4.79
DENND5B-205ENST00000544698 NACADO15069 1562 aa44.84■■■■■ 4.77
DENND5B-205ENST00000544698 MYO15BQ96JP2 1530 aa44.29■■■■■ 4.68
DENND5B-205ENST00000544698 ZCCHC6Q5VYS8 1495 aaKnown RBP44.27■■■■■ 4.68
DENND5B-205ENST00000544698 UNC13AQ9UPW8 1703 aa44.18■■■■■ 4.66
DENND5B-205ENST00000544698 PABPN1Q86U42 306 aaKnown RBP eCLIP43.99■■■■■ 4.63
DENND5B-205ENST00000544698 DCAF1Q9Y4B6 1507 aa43.97■■■■■ 4.63
DENND5B-205ENST00000544698 BICRAQ9NZM4 1560 aa43.67■■■■■ 4.58
DENND5B-205ENST00000544698 DNAJC5BQ9UF47 199 aa43.64■■■■■ 4.58
DENND5B-205ENST00000544698 SCRIBQ14160 1630 aa43.51■■■■■ 4.56
DENND5B-205ENST00000544698 SHROOM4Q9ULL8 1493 aa43.07■■■■■ 4.49
DENND5B-205ENST00000544698 EIF4G1Q04637 1599 aaKnown RBP42.6■■■■■ 4.41
DENND5B-205ENST00000544698 CC2D2AQ9P2K1 1620 aa42.58■■■■■ 4.41
DENND5B-205ENST00000544698 CECR2Q9BXF3 1484 aa42.36■■■■■ 4.37
DENND5B-205ENST00000544698 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
DENND5B-205ENST00000544698 ATAD2BQ9ULI0 1458 aa41.34■■■■■ 4.21
DENND5B-205ENST00000544698 BAZ1AQ9NRL2 1556 aaPredicted RBP41.34■■■■■ 4.21
DENND5B-205ENST00000544698 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
DENND5B-205ENST00000544698 SMARCA2P51531 1590 aa41.29■■■■■ 4.2
DENND5B-205ENST00000544698 HMGXB3Q12766 1538 aa41.13■■■■■ 4.17
DENND5B-205ENST00000544698 MROH2BQ7Z745 1585 aa41.09■■■■■ 4.17
DENND5B-205ENST00000544698 BAZ1BQ9UIG0 1483 aaKnown RBP41.04■■■■■ 4.16
DENND5B-205ENST00000544698 PEG3Q9GZU2 1588 aa41■■■■■ 4.15
DENND5B-205ENST00000544698 ERCC6Q03468 1493 aa40.7■■■■■ 4.11
DENND5B-205ENST00000544698 WIZO95785 1651 aa40.69■■■■■ 4.1
DENND5B-205ENST00000544698 NESP48681 1621 aa40.64■■■■■ 4.1
DENND5B-205ENST00000544698 RSF1Q96T23 1441 aaPredicted RBP40.41■■■■■ 4.06
DENND5B-205ENST00000544698 LAMC3Q9Y6N6 1575 aa40.39■■■■■ 4.06
DENND5B-205ENST00000544698 CUX2O14529 1486 aa40.32■■■■■ 4.04
DENND5B-205ENST00000544698 KIF21AQ7Z4S6 1674 aa40.18■■■■■ 4.02
DENND5B-205ENST00000544698 CADPSQ9ULU8 1353 aa40.16■■■■■ 4.02
DENND5B-205ENST00000544698 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
DENND5B-205ENST00000544698 PDS5BQ9NTI5 1447 aa40.15■■■■■ 4.02
DENND5B-205ENST00000544698 THOC2Q8NI27 1593 aaKnown RBP40.08■■■■■ 4.01
DENND5B-205ENST00000544698 CFTRP13569 1480 aa39.8■■■■□ 3.96
DENND5B-205ENST00000544698 MRC2Q9UBG0 1479 aa39.78■■■■□ 3.96
DENND5B-205ENST00000544698 CEP164Q9UPV0 1460 aa39.76■■■■□ 3.96
DENND5B-205ENST00000544698 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
DENND5B-205ENST00000544698 CCDC88BA6NC98 1476 aa39.69■■■■□ 3.94
DENND5B-205ENST00000544698 PRDM2Q13029 1718 aa39.68■■■■□ 3.94
DENND5B-205ENST00000544698 DNAJC5Q9H3Z4 198 aa39.65■■■■□ 3.94
DENND5B-205ENST00000544698 WDR62O43379 1518 aa39.63■■■■□ 3.93
DENND5B-205ENST00000544698 URB2Q14146 1524 aaKnown RBP39.37■■■■□ 3.89
DENND5B-205ENST00000544698 SUPT5HO00267 1087 aaKnown RBP39.23■■■■□ 3.87
DENND5B-205ENST00000544698 TOPBP1Q92547 1522 aa39.05■■■■□ 3.84
DENND5B-205ENST00000544698 ABCC8Q09428 1581 aa38.97■■■■□ 3.83
DENND5B-205ENST00000544698 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
DENND5B-205ENST00000544698 IFT140Q96RY7 1462 aa38.91■■■■□ 3.82
DENND5B-205ENST00000544698 ZNF608Q9ULD9 1512 aaPredicted RBP38.81■■■■□ 3.8
DENND5B-205ENST00000544698 POLA1P09884 1462 aaPredicted RBP38.68■■■■□ 3.78
DENND5B-205ENST00000544698 EIF4G3O43432 1585 aaKnown RBP38.65■■■■□ 3.78
DENND5B-205ENST00000544698 TARBP1Q13395 1621 aaKnown RBP38.64■■■■□ 3.78
DENND5B-205ENST00000544698 OSCARQ8IYS5 282 aa38.62■■■■□ 3.77
DENND5B-205ENST00000544698 CUX1P39880 1505 aa38.58■■■■□ 3.77
DENND5B-205ENST00000544698 RAD54L2Q9Y4B4 1467 aa38.57■■■■□ 3.76
DENND5B-205ENST00000544698 AQRO60306 1485 aaKnown RBP eCLIP38.55■■■■□ 3.76
DENND5B-205ENST00000544698 FGD5Q6ZNL6 1462 aa38.55■■■■□ 3.76
DENND5B-205ENST00000544698 SOGA1O94964 1423 aa38.54■■■■□ 3.76
DENND5B-205ENST00000544698 TDRD9Q8NDG6 1382 aaKnown RBP38.41■■■■□ 3.74
DENND5B-205ENST00000544698 TRIM41Q8WV44 630 aa38.35■■■■□ 3.73
DENND5B-205ENST00000544698 CHD1O14646 1710 aa38.32■■■■□ 3.72
DENND5B-205ENST00000544698 WDR97A6NE52 1622 aa38.31■■■■□ 3.72
DENND5B-205ENST00000544698 FBLN2P98095 1184 aa38.31■■■■□ 3.72
DENND5B-205ENST00000544698 SNAPC4Q5SXM2 1469 aa38.18■■■■□ 3.7
DENND5B-205ENST00000544698 BIVM-ERCC5R4GMW8 1640 aa38.18■■■■□ 3.7
DENND5B-205ENST00000544698 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
DENND5B-205ENST00000544698 SYNJ1O43426 1573 aa38.14■■■■□ 3.7
DENND5B-205ENST00000544698 GRIN2BQ13224 1484 aa38.13■■■■□ 3.69
DENND5B-205ENST00000544698 TOP2BQ02880 1626 aa38.12■■■■□ 3.69
DENND5B-205ENST00000544698 PBRM1Q86U86 1689 aa38.11■■■■□ 3.69
DENND5B-205ENST00000544698 RIMBP3CA6NJZ7 1639 aa38.09■■■■□ 3.69
DENND5B-205ENST00000544698 RIMBP3BA6NNM3 1639 aa38.09■■■■□ 3.69
DENND5B-205ENST00000544698 RIMBP3Q9UFD9 1639 aa38.09■■■■□ 3.69
DENND5B-205ENST00000544698 ABCA10Q8WWZ4 1543 aa38.08■■■■□ 3.69
DENND5B-205ENST00000544698 GAPVD1Q14C86 1478 aa38.08■■■■□ 3.69
DENND5B-205ENST00000544698 MAGI1Q96QZ7 1491 aaPredicted RBP38.04■■■■□ 3.68
DENND5B-205ENST00000544698 CHMP7Q8WUX9 453 aaPredicted RBP38.04■■■■□ 3.68
DENND5B-205ENST00000544698 ABCA5Q8WWZ7 1642 aa38.01■■■■□ 3.68
DENND5B-205ENST00000544698 ARHGEF11O15085 1522 aa37.99■■■■□ 3.67
DENND5B-205ENST00000544698 SYNJ2O15056 1496 aa37.93■■■■□ 3.66
DENND5B-205ENST00000544698 CLASP1Q7Z460 1538 aa37.77■■■■□ 3.64
DENND5B-205ENST00000544698 CYB5RLQ6IPT4 315 aa37.74■■■■□ 3.63
DENND5B-205ENST00000544698 ADAMTS12P58397 1594 aa37.7■■■■□ 3.63
DENND5B-205ENST00000544698 ARAP1Q96P48 1450 aa37.64■■■■□ 3.62
DENND5B-205ENST00000544698 GRIN2AQ12879 1464 aa37.64■■■■□ 3.62
DENND5B-205ENST00000544698 ERICH3Q5RHP9 1530 aa37.62■■■■□ 3.61
DENND5B-205ENST00000544698 FHAD1B1AJZ9 1412 aa37.6■■■■□ 3.61
DENND5B-205ENST00000544698 CEP170Q5SW79 1584 aa37.5■■■■□ 3.59
DENND5B-205ENST00000544698 NUP160Q12769 1436 aa37.43■■■■□ 3.58
DENND5B-205ENST00000544698 KIF27Q86VH2 1401 aa37.4■■■■□ 3.58
DENND5B-205ENST00000544698 ERCC6L2Q5T890 1561 aa37.29■■■■□ 3.56
DENND5B-205ENST00000544698 IGF1RP08069 1367 aa37.26■■■■□ 3.55
DENND5B-205ENST00000544698 CUL7Q14999 1698 aa37.25■■■■□ 3.55
DENND5B-205ENST00000544698 SHROOM2Q13796 1616 aa37.23■■■■□ 3.55
DENND5B-205ENST00000544698 TRHP20396 242 aaPredicted RBP37.21■■■■□ 3.55
DENND5B-205ENST00000544698 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms