RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
MCM4-216ENST00000524086 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
MCM4-216ENST00000524086 ABCC9O60706 1549 aa27.94■■■□□ 2.06
MCM4-216ENST00000524086 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
MCM4-216ENST00000524086 NACADO15069 1562 aa26.54■■□□□ 1.84
MCM4-216ENST00000524086 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
MCM4-216ENST00000524086 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
MCM4-216ENST00000524086 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
MCM4-216ENST00000524086 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
MCM4-216ENST00000524086 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
MCM4-216ENST00000524086 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
MCM4-216ENST00000524086 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
MCM4-216ENST00000524086 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
MCM4-216ENST00000524086 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
MCM4-216ENST00000524086 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
MCM4-216ENST00000524086 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
MCM4-216ENST00000524086 CC2D2AQ9P2K1 1620 aa25.22■■□□□ 1.63
MCM4-216ENST00000524086 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
MCM4-216ENST00000524086 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
MCM4-216ENST00000524086 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
MCM4-216ENST00000524086 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
MCM4-216ENST00000524086 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
MCM4-216ENST00000524086 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
MCM4-216ENST00000524086 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
MCM4-216ENST00000524086 ERCC6Q03468 1493 aa24.2■■□□□ 1.47
MCM4-216ENST00000524086 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
MCM4-216ENST00000524086 CUX2O14529 1486 aa24.18■■□□□ 1.46
MCM4-216ENST00000524086 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
MCM4-216ENST00000524086 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
MCM4-216ENST00000524086 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
MCM4-216ENST00000524086 NESP48681 1621 aa23.96■■□□□ 1.43
MCM4-216ENST00000524086 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
MCM4-216ENST00000524086 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
MCM4-216ENST00000524086 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
MCM4-216ENST00000524086 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
MCM4-216ENST00000524086 WIZO95785 1651 aa23.67■■□□□ 1.38
MCM4-216ENST00000524086 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
MCM4-216ENST00000524086 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
MCM4-216ENST00000524086 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
MCM4-216ENST00000524086 CFTRP13569 1480 aa23.49■■□□□ 1.35
MCM4-216ENST00000524086 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
MCM4-216ENST00000524086 WDR62O43379 1518 aa23.46■■□□□ 1.35
MCM4-216ENST00000524086 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
MCM4-216ENST00000524086 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
MCM4-216ENST00000524086 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
MCM4-216ENST00000524086 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
MCM4-216ENST00000524086 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
MCM4-216ENST00000524086 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
MCM4-216ENST00000524086 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
MCM4-216ENST00000524086 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
MCM4-216ENST00000524086 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
MCM4-216ENST00000524086 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
MCM4-216ENST00000524086 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
MCM4-216ENST00000524086 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
MCM4-216ENST00000524086 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.234e-11■■■■■ 47.1
MCM4-216ENST00000524086 SOGA1O94964 1423 aa22.75■■□□□ 1.23
MCM4-216ENST00000524086 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
MCM4-216ENST00000524086 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
MCM4-216ENST00000524086 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
MCM4-216ENST00000524086 FBLN2P98095 1184 aa22.7■■□□□ 1.22
MCM4-216ENST00000524086 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
MCM4-216ENST00000524086 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
MCM4-216ENST00000524086 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
MCM4-216ENST00000524086 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
MCM4-216ENST00000524086 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
MCM4-216ENST00000524086 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
MCM4-216ENST00000524086 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
MCM4-216ENST00000524086 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
MCM4-216ENST00000524086 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
MCM4-216ENST00000524086 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
MCM4-216ENST00000524086 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
MCM4-216ENST00000524086 CUX1P39880 1505 aa22.56■■□□□ 1.2
MCM4-216ENST00000524086 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
MCM4-216ENST00000524086 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
MCM4-216ENST00000524086 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
MCM4-216ENST00000524086 CHD1O14646 1710 aa22.48■■□□□ 1.19
MCM4-216ENST00000524086 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
MCM4-216ENST00000524086 SYNJ2O15056 1496 aa22.43■■□□□ 1.18
MCM4-216ENST00000524086 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
MCM4-216ENST00000524086 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
MCM4-216ENST00000524086 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
MCM4-216ENST00000524086 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
MCM4-216ENST00000524086 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
MCM4-216ENST00000524086 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
MCM4-216ENST00000524086 ABCA5Q8WWZ7 1642 aa22.26■■□□□ 1.15
MCM4-216ENST00000524086 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
MCM4-216ENST00000524086 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
MCM4-216ENST00000524086 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
MCM4-216ENST00000524086 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
MCM4-216ENST00000524086 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
MCM4-216ENST00000524086 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
MCM4-216ENST00000524086 NUP160Q12769 1436 aa22.13■■□□□ 1.13
MCM4-216ENST00000524086 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
MCM4-216ENST00000524086 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
MCM4-216ENST00000524086 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
MCM4-216ENST00000524086 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
MCM4-216ENST00000524086 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
MCM4-216ENST00000524086 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
MCM4-216ENST00000524086 IGF1RP08069 1367 aa21.91■■□□□ 1.1
MCM4-216ENST00000524086 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms