Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 RSC4YKR008W 1878 nt8.37□□□□□ -1.07
TY2A-FP0CX61 SGA1YIL099W 1650 nt8.37□□□□□ -1.07
TY2A-FP0CX61 HIS2YFR025C 1008 nt8.36□□□□□ -1.07
TY2A-FP0CX61 MHF1YOL086W-A 273 nt8.36□□□□□ -1.07
TY2A-FP0CX61 GID8YMR135C 1368 nt8.35□□□□□ -1.07
TY2A-FP0CX61 YJR114WYJR114W 393 nt8.34□□□□□ -1.07
TY2A-FP0CX61 YFR036W-AYFR036W-A 651 nt8.33□□□□□ -1.08
TY2A-FP0CX61 SPS100YHR139C 981 nt8.33□□□□□ -1.08
TY2A-FP0CX61 POT1YIL160C 1254 nt8.33□□□□□ -1.08
TY2A-FP0CX61 YMR262WYMR262W 942 nt8.32□□□□□ -1.08
TY2A-FP0CX61 UGP1YKL035W 1500 nt8.31□□□□□ -1.08
TY2A-FP0CX61 SAC7YDR389W 1965 nt8.31□□□□□ -1.08
TY2A-FP0CX61 YGL114WYGL114W 2178 nt8.31□□□□□ -1.08
TY2A-FP0CX61 YKL133CYKL133C 1392 nt8.3□□□□□ -1.08
TY2A-FP0CX61 DLD3YEL071W 1491 nt8.3□□□□□ -1.08
TY2A-FP0CX61 tS(GCU)LtS(GCU)L 80 nt8.29□□□□□ -1.08
TY2A-FP0CX61 YNR064CYNR064C 873 nt8.29□□□□□ -1.08
TY2A-FP0CX61 MRS6YOR370C 1812 nt8.29□□□□□ -1.08
TY2A-FP0CX61 TVP23YDR084C 600 nt8.28□□□□□ -1.08
TY2A-FP0CX61 OPI3YJR073C 621 nt8.28□□□□□ -1.08
TY2A-FP0CX61 MET2YNL277W 1461 nt8.27□□□□□ -1.09
TY2A-FP0CX61 ITR2YOL103W 1830 nt8.27□□□□□ -1.09
TY2A-FP0CX61 PAU5YFL020C 369 nt8.27□□□□□ -1.09
TY2A-FP0CX61 ABZ2YMR289W 1125 nt8.27□□□□□ -1.09
TY2A-FP0CX61 TIP1YBR067C 633 nt8.27□□□□□ -1.09
TY2A-FP0CX61 YDR306CYDR306C 1437 nt8.27□□□□□ -1.09
TY2A-FP0CX61 YHR219WYHR219W 1875 nt8.26□□□□□ -1.09
TY2A-FP0CX61 MAE1YKL029C 2010 nt8.26□□□□□ -1.09
TY2A-FP0CX61 LSR1LSR1 1175 nt8.26□□□□□ -1.09
TY2A-FP0CX61 ELO1YJL196C 933 nt8.25□□□□□ -1.09
TY2A-FP0CX61 GSF2YML048W 1212 nt8.25□□□□□ -1.09
TY2A-FP0CX61 ESS1YJR017C 513 nt8.24□□□□□ -1.09
TY2A-FP0CX61 VMA11YPL234C 495 nt8.24□□□□□ -1.09
TY2A-FP0CX61 ZAP1YJL056C 2643 nt8.24□□□□□ -1.09
TY2A-FP0CX61 ENO2YHR174W 1314 nt8.23□□□□□ -1.09
TY2A-FP0CX61 TUB4YLR212C 1422 nt8.22□□□□□ -1.09
TY2A-FP0CX61 APS2YJR058C 444 nt8.22□□□□□ -1.09
TY2A-FP0CX61 RPD3YNL330C 1302 nt8.22□□□□□ -1.09
TY2A-FP0CX61 PGC1YPL206C 966 nt8.21□□□□□ -1.1
TY2A-FP0CX61 PAB1YER165W 1734 nt8.2□□□□□ -1.1
TY2A-FP0CX61 PUS7YOR243C 2031 nt8.2□□□□□ -1.1
TY2A-FP0CX61 STP3YLR375W 1032 nt8.2□□□□□ -1.1
TY2A-FP0CX61 KEL3YPL263C 1956 nt8.19□□□□□ -1.1
TY2A-FP0CX61 NIF3YGL221C 867 nt8.19□□□□□ -1.1
TY2A-FP0CX61 KRE1YNL322C 942 nt8.19□□□□□ -1.1
TY2A-FP0CX61 AMF1YOR378W 1548 nt8.19□□□□□ -1.1
TY2A-FP0CX61 YMR265CYMR265C 1386 nt8.18□□□□□ -1.1
TY2A-FP0CX61 PCP1YGR101W 1041 nt8.17□□□□□ -1.1
TY2A-FP0CX61 SNX3YOR357C 489 nt8.17□□□□□ -1.1
TY2A-FP0CX61 HAP5YOR358W 729 nt8.17□□□□□ -1.1
TY2A-FP0CX61 ODC1YPL134C 933 nt8.17□□□□□ -1.1
TY2A-FP0CX61 RPN14YGL004C 1254 nt8.16□□□□□ -1.1
TY2A-FP0CX61 TIM44YIL022W 1296 nt8.16□□□□□ -1.1
TY2A-FP0CX61 SSL2YIL143C 2532 nt8.15□□□□□ -1.1
TY2A-FP0CX61 YMR209CYMR209C 1374 nt8.15□□□□□ -1.1
TY2A-FP0CX61 YBR232CYBR232C 360 nt8.15□□□□□ -1.1
TY2A-FP0CX61 PAR32YDL173W 888 nt8.14□□□□□ -1.11
TY2A-FP0CX61 TPC1YGR096W 945 nt8.14□□□□□ -1.11
TY2A-FP0CX61 CWP2YKL096W-A 279 nt8.14□□□□□ -1.11
TY2A-FP0CX61 SUV3YPL029W 2214 nt8.13□□□□□ -1.11
TY2A-FP0CX61 SWT21YNL187W 1074 nt8.13□□□□□ -1.11
TY2A-FP0CX61 SPE2YOL052C 1191 nt8.13□□□□□ -1.11
TY2A-FP0CX61 snR31snR31 225 nt8.13□□□□□ -1.11
TY2A-FP0CX61 SFP1YLR403W 2052 nt8.13□□□□□ -1.11
TY2A-FP0CX61 SFL1YOR140W 2301 nt8.11□□□□□ -1.11
TY2A-FP0CX61 MET1YKR069W 1782 nt8.1□□□□□ -1.11
TY2A-FP0CX61 ACO2YJL200C 2370 nt8.1□□□□□ -1.11
TY2A-FP0CX61 LEU2YCL018W 1095 nt8.1□□□□□ -1.11
TY2A-FP0CX61 HEM14YER014W 1620 nt8.1□□□□□ -1.11
TY2A-FP0CX61 GID7YCL039W 2238 nt8.1□□□□□ -1.11
TY2A-FP0CX61 NAS2YIL007C 663 nt8.09□□□□□ -1.11
TY2A-FP0CX61 RPC31YNL151C 756 nt8.09□□□□□ -1.11
TY2A-FP0CX61 CRC1YOR100C 984 nt8.09□□□□□ -1.11
TY2A-FP0CX61 SEN2YLR105C 1134 nt8.08□□□□□ -1.12
TY2A-FP0CX61 THP3YPR045C 1413 nt8.07□□□□□ -1.12
TY2A-FP0CX61 KRR1YCL059C 951 nt8.07□□□□□ -1.12
TY2A-FP0CX61 NAM8YHR086W 1572 nt8.06□□□□□ -1.12
TY2A-FP0CX61 IGD1YFR017C 588 nt8.06□□□□□ -1.12
TY2A-FP0CX61 MDM35YKL053C-A 261 nt8.06□□□□□ -1.12
TY2A-FP0CX61 YKL053WYKL053W 375 nt8.06□□□□□ -1.12
TY2A-FP0CX61 DMA2YNL116W 1569 nt8.05□□□□□ -1.12
TY2A-FP0CX61 ESBP6YNL125C 2022 nt8.05□□□□□ -1.12
TY2A-FP0CX61 FSH2YMR222C 672 nt8.05□□□□□ -1.12
TY2A-FP0CX61 RIM2YBR192W 1134 nt8.05□□□□□ -1.12
TY2A-FP0CX61 NAP1YKR048C 1254 nt8.02□□□□□ -1.13
TY2A-FP0CX61 CDD1YLR245C 429 nt8.02□□□□□ -1.13
TY2A-FP0CX61 YJL064WYJL064W 396 nt8.01□□□□□ -1.13
TY2A-FP0CX61 YKR012CYKR012C 378 nt8.01□□□□□ -1.13
TY2A-FP0CX61 REX2YLR059C 810 nt8.01□□□□□ -1.13
TY2A-FP0CX61 SRP54YPR088C 1626 nt8□□□□□ -1.13
TY2A-FP0CX61 KGD2YDR148C 1392 nt8□□□□□ -1.13
TY2A-FP0CX61 PSD1YNL169C 1503 nt8□□□□□ -1.13
TY2A-FP0CX61 NAS6YGR232W 687 nt8□□□□□ -1.13
TY2A-FP0CX61 DPL1YDR294C 1770 nt7.99□□□□□ -1.13
TY2A-FP0CX61 ADH3YMR083W 1128 nt7.99□□□□□ -1.13
TY2A-FP0CX61 CYT1YOR065W 930 nt7.99□□□□□ -1.13
TY2A-FP0CX61 PAU19YMR325W 375 nt7.98□□□□□ -1.13
TY2A-FP0CX61 TPO4YOR273C 1980 nt7.98□□□□□ -1.13
TY2A-FP0CX61 SAN1YDR143C 1833 nt7.98□□□□□ -1.13
TY2A-FP0CX61 tA(AGC)DtA(AGC)D 73 nt7.96□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 23.5 ms