Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YLR307C-AYLR307C-A 264 nt0.51□□□□□ -2.33
RKR1Q04781 YMR147WYMR147W 672 nt0.51□□□□□ -2.33
RKR1Q04781 CAF20YOR276W 486 nt0.51□□□□□ -2.33
RKR1Q04781 YBR096WYBR096W 693 nt0.51□□□□□ -2.33
RKR1Q04781 SLY1YDR189W 2001 nt0.5□□□□□ -2.33
RKR1Q04781 PEX12YMR026C 1200 nt0.5□□□□□ -2.33
RKR1Q04781 YMR086C-AYMR086C-A 339 nt0.5□□□□□ -2.33
RKR1Q04781 YNL179CYNL179C 438 nt0.5□□□□□ -2.33
RKR1Q04781 UFE1YOR075W 1041 nt0.5□□□□□ -2.33
RKR1Q04781 YOR152CYOR152C 771 nt0.5□□□□□ -2.33
RKR1Q04781 RIM20YOR275C 1986 nt0.5□□□□□ -2.33
RKR1Q04781 YDL186WYDL186W 834 nt0.49□□□□□ -2.33
RKR1Q04781 SLK19YOR195W 2466 nt0.49□□□□□ -2.33
RKR1Q04781 LYS14YDR034C 2373 nt0.48□□□□□ -2.33
RKR1Q04781 PIN4YBL051C 2007 nt0.48□□□□□ -2.33
RKR1Q04781 PAF1YBR279W 1338 nt0.48□□□□□ -2.33
RKR1Q04781 BDP1YNL039W 1785 nt0.47□□□□□ -2.33
RKR1Q04781 YMR052C-AYMR052C-A 366 nt0.47□□□□□ -2.33
RKR1Q04781 YDR132CYDR132C 1488 nt0.46□□□□□ -2.34
RKR1Q04781 YDL026WYDL026W 312 nt0.45□□□□□ -2.34
RKR1Q04781 BNA7YDR428C 786 nt0.45□□□□□ -2.34
RKR1Q04781 YAR075WYAR075W 474 nt0.45□□□□□ -2.34
RKR1Q04781 MFB1YDR219C 1398 nt0.45□□□□□ -2.34
RKR1Q04781 SAS3YBL052C 2496 nt0.45□□□□□ -2.34
RKR1Q04781 21S_rRNA21S_rRNA 3296 nt0.45□□□□□ -2.34
RKR1Q04781 YDR018CYDR018C 1191 nt0.45□□□□□ -2.34
RKR1Q04781 YOR263CYOR263C 408 nt0.45□□□□□ -2.34
RKR1Q04781 RGI1YER067W 486 nt0.44□□□□□ -2.34
RKR1Q04781 YIP1YGR172C 747 nt0.43□□□□□ -2.34
RKR1Q04781 ABM1YJR108W 372 nt0.43□□□□□ -2.34
RKR1Q04781 YGR190CYGR190C 366 nt0.42□□□□□ -2.34
RKR1Q04781 SAY1YGR263C 1275 nt0.42□□□□□ -2.34
RKR1Q04781 RPL40AYIL148W 387 nt0.42□□□□□ -2.34
RKR1Q04781 SNC2YOR327C 348 nt0.42□□□□□ -2.34
RKR1Q04781 CUR1YPR158W 759 nt0.42□□□□□ -2.34
RKR1Q04781 YLR149CYLR149C 2193 nt0.42□□□□□ -2.34
RKR1Q04781 PCL9YDL179W 915 nt0.41□□□□□ -2.34
RKR1Q04781 RPL37BYDR500C 267 nt0.41□□□□□ -2.34
RKR1Q04781 YGR039WYGR039W 312 nt0.41□□□□□ -2.34
RKR1Q04781 KAR9YPL269W 1935 nt0.41□□□□□ -2.34
RKR1Q04781 VMA5YKL080W 1179 nt0.4□□□□□ -2.34
RKR1Q04781 ATG38YLR211C 681 nt0.4□□□□□ -2.34
RKR1Q04781 snR45snR45 172 nt0.4□□□□□ -2.34
RKR1Q04781 YKL156C-AYKL156C-A 117 nt0.4□□□□□ -2.35
RKR1Q04781 YLR053CYLR053C 327 nt0.39□□□□□ -2.35
RKR1Q04781 YAP3YHL009C 993 nt0.38□□□□□ -2.35
RKR1Q04781 BPH1YCR032W 6504 nt0.38□□□□□ -2.35
RKR1Q04781 NGG1YDR176W 2109 nt0.37□□□□□ -2.35
RKR1Q04781 YDL183CYDL183C 963 nt0.37□□□□□ -2.35
RKR1Q04781 YIL012WYIL012W 342 nt0.37□□□□□ -2.35
RKR1Q04781 HYR1YIR037W 492 nt0.37□□□□□ -2.35
RKR1Q04781 MRP2YPR166C 348 nt0.37□□□□□ -2.35
RKR1Q04781 PEX34YCL056C 435 nt0.37□□□□□ -2.35
RKR1Q04781 HMI1YOL095C 2121 nt0.37□□□□□ -2.35
RKR1Q04781 NNF2YGR089W 2811 nt0.37□□□□□ -2.35
RKR1Q04781 DAL5YJR152W 1632 nt0.37□□□□□ -2.35
RKR1Q04781 YHR214W-AYHR214W-A 486 nt0.36□□□□□ -2.35
RKR1Q04781 YAR068WYAR068W 486 nt0.36□□□□□ -2.35
RKR1Q04781 APD1YBR151W 951 nt0.36□□□□□ -2.35
RKR1Q04781 CTR9YOL145C 3234 nt0.36□□□□□ -2.35
RKR1Q04781 UBC5YDR059C 447 nt0.36□□□□□ -2.35
RKR1Q04781 BTN2YGR142W 1233 nt0.36□□□□□ -2.35
RKR1Q04781 MRPL49YJL096W 486 nt0.36□□□□□ -2.35
RKR1Q04781 ICS2YBR157C 768 nt0.36□□□□□ -2.35
RKR1Q04781 RTG3YBL103C 1461 nt0.34□□□□□ -2.35
RKR1Q04781 YDL050CYDL050C 372 nt0.34□□□□□ -2.36
RKR1Q04781 YRO2YBR054W 1035 nt0.34□□□□□ -2.36
RKR1Q04781 NSE3YDR288W 912 nt0.33□□□□□ -2.36
RKR1Q04781 MTC7YEL033W 420 nt0.33□□□□□ -2.36
RKR1Q04781 SEC22YLR268W 645 nt0.33□□□□□ -2.36
RKR1Q04781 YLR379WYLR379W 375 nt0.33□□□□□ -2.36
RKR1Q04781 AIM36YMR157C 768 nt0.33□□□□□ -2.36
RKR1Q04781 YPR145C-AYPR145C-A 237 nt0.33□□□□□ -2.36
RKR1Q04781 GLG1YKR058W 1851 nt0.33□□□□□ -2.36
RKR1Q04781 YDR248CYDR248C 582 nt0.32□□□□□ -2.36
RKR1Q04781 TAD1YGL243W 1203 nt0.32□□□□□ -2.36
RKR1Q04781 YOR062CYOR062C 807 nt0.32□□□□□ -2.36
RKR1Q04781 YPR063CYPR063C 423 nt0.32□□□□□ -2.36
RKR1Q04781 YPR159C-AYPR159C-A 102 nt0.32□□□□□ -2.36
RKR1Q04781 RGM1YMR182C 636 nt0.32□□□□□ -2.36
RKR1Q04781 HUB1YNR032C-A 222 nt0.32□□□□□ -2.36
RKR1Q04781 PUS9YDL036C 1389 nt0.31□□□□□ -2.36
RKR1Q04781 BTT1YDR252W 450 nt0.31□□□□□ -2.36
RKR1Q04781 YER088C-AYER088C-A 324 nt0.31□□□□□ -2.36
RKR1Q04781 YAR053WYAR053W 297 nt0.31□□□□□ -2.36
RKR1Q04781 YMR144WYMR144W 1029 nt0.31□□□□□ -2.36
RKR1Q04781 ULI1YFR026C 510 nt0.3□□□□□ -2.36
RKR1Q04781 MMF1YIL051C 438 nt0.3□□□□□ -2.36
RKR1Q04781 RPL38YLR325C 237 nt0.3□□□□□ -2.36
RKR1Q04781 PEX27YOR193W 1131 nt0.3□□□□□ -2.36
RKR1Q04781 CUP9YPL177C 921 nt0.3□□□□□ -2.36
RKR1Q04781 RXT2YBR095C 1293 nt0.3□□□□□ -2.36
RKR1Q04781 DGR2YKL121W 2559 nt0.3□□□□□ -2.36
RKR1Q04781 ACB1YGR037C 264 nt0.29□□□□□ -2.36
RKR1Q04781 SEC5YDR166C 2916 nt0.29□□□□□ -2.36
RKR1Q04781 MUS81YDR386W 1899 nt0.29□□□□□ -2.36
RKR1Q04781 RNP1YLL046C 750 nt0.28□□□□□ -2.36
RKR1Q04781 HAL9YOL089C 3093 nt0.28□□□□□ -2.36
RKR1Q04781 HSE1YHL002W 1359 nt0.27□□□□□ -2.37
RKR1Q04781 NCA2YPR155C 1851 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 258.5 ms