Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 RPS24AYER074W 408 nt3.29□□□□□ -1.88
ROT1Q03691 YIL020C-AYIL020C-A 339 nt3.29□□□□□ -1.88
ROT1Q03691 YIL102CYIL102C 306 nt3.29□□□□□ -1.88
ROT1Q03691 YLR416CYLR416C 399 nt3.29□□□□□ -1.88
ROT1Q03691 PEX11YOL147C 711 nt3.29□□□□□ -1.88
ROT1Q03691 YPL182CYPL182C 384 nt3.29□□□□□ -1.88
ROT1Q03691 TRZ1YKR079C 2517 nt3.29□□□□□ -1.88
ROT1Q03691 SLM2YNL047C 1971 nt3.29□□□□□ -1.88
ROT1Q03691 FUS1YCL027W 1539 nt3.29□□□□□ -1.88
ROT1Q03691 ARK1YNL020C 1917 nt3.29□□□□□ -1.88
ROT1Q03691 DBP6YNR038W 1890 nt3.28□□□□□ -1.88
ROT1Q03691 COG8YML071C 1824 nt3.28□□□□□ -1.88
ROT1Q03691 YDR193WYDR193W 399 nt3.28□□□□□ -1.88
ROT1Q03691 YKR033CYKR033C 426 nt3.28□□□□□ -1.88
ROT1Q03691 RPS8AYBL072C 603 nt3.28□□□□□ -1.88
ROT1Q03691 YPR022CYPR022C 3402 nt3.28□□□□□ -1.88
ROT1Q03691 AIM9YER080W 1884 nt3.28□□□□□ -1.88
ROT1Q03691 AKR1YDR264C 2295 nt3.27□□□□□ -1.89
ROT1Q03691 CAF130YGR134W 3369 nt3.27□□□□□ -1.89
ROT1Q03691 YDR048CYDR048C 315 nt3.27□□□□□ -1.89
ROT1Q03691 YHL042WYHL042W 453 nt3.27□□□□□ -1.89
ROT1Q03691 YMR122W-AYMR122W-A 255 nt3.27□□□□□ -1.89
ROT1Q03691 ESF2YNR054C 951 nt3.27□□□□□ -1.89
ROT1Q03691 ALA1YOR335C 2877 nt3.27□□□□□ -1.89
ROT1Q03691 SPT6YGR116W 4356 nt3.27□□□□□ -1.89
ROT1Q03691 OSH3YHR073W 2991 nt3.27□□□□□ -1.89
ROT1Q03691 YGR237CYGR237C 2358 nt3.26□□□□□ -1.89
ROT1Q03691 RPO31YOR116C 4383 nt3.26□□□□□ -1.89
ROT1Q03691 NPR2YEL062W 1848 nt3.26□□□□□ -1.89
ROT1Q03691 snR55snR55 98 nt3.26□□□□□ -1.89
ROT1Q03691 YJL020W-AYJL020W-A 258 nt3.26□□□□□ -1.89
ROT1Q03691 NCE101YJL205C 162 nt3.26□□□□□ -1.89
ROT1Q03691 HFM1YGL251C 3564 nt3.26□□□□□ -1.89
ROT1Q03691 YDL176WYDL176W 2127 nt3.26□□□□□ -1.89
ROT1Q03691 UBP5YER144C 2418 nt3.25□□□□□ -1.89
ROT1Q03691 TAF1YGR274C 3201 nt3.25□□□□□ -1.89
ROT1Q03691 MVP1YMR004W 1536 nt3.25□□□□□ -1.89
ROT1Q03691 VPS52YDR484W 1926 nt3.25□□□□□ -1.89
ROT1Q03691 MSR1YHR091C 1932 nt3.25□□□□□ -1.89
ROT1Q03691 RPS18BYML026C 441 nt3.25□□□□□ -1.89
ROT1Q03691 SCW11YGL028C 1629 nt3.24□□□□□ -1.89
ROT1Q03691 PAU10YDR542W 363 nt3.24□□□□□ -1.89
ROT1Q03691 PAU11YGL261C 363 nt3.24□□□□□ -1.89
ROT1Q03691 YIL032CYIL032C 357 nt3.24□□□□□ -1.89
ROT1Q03691 PAU4YLR461W 363 nt3.24□□□□□ -1.89
ROT1Q03691 YPR053CYPR053C 456 nt3.24□□□□□ -1.89
ROT1Q03691 YBR197CYBR197C 654 nt3.24□□□□□ -1.89
ROT1Q03691 CIN1YOR349W 3045 nt3.24□□□□□ -1.89
ROT1Q03691 NMA111YNL123W 2994 nt3.24□□□□□ -1.89
ROT1Q03691 MSS11YMR164C 2277 nt3.23□□□□□ -1.89
ROT1Q03691 YDL041WYDL041W 354 nt3.23□□□□□ -1.89
ROT1Q03691 YGL052WYGL052W 306 nt3.23□□□□□ -1.89
ROT1Q03691 YTA7YGR270W 4140 nt3.23□□□□□ -1.89
ROT1Q03691 YIL058WYIL058W 285 nt3.23□□□□□ -1.89
ROT1Q03691 YMR194C-AYMR194C-A 225 nt3.23□□□□□ -1.89
ROT1Q03691 SWD3YBR175W 948 nt3.23□□□□□ -1.89
ROT1Q03691 CHS3YBR023C 3498 nt3.23□□□□□ -1.89
ROT1Q03691 KRE5YOR336W 4098 nt3.23□□□□□ -1.89
ROT1Q03691 ARG2YJL071W 1725 nt3.22□□□□□ -1.89
ROT1Q03691 IOC3YFR013W 2364 nt3.22□□□□□ -1.89
ROT1Q03691 GPG1YGL121C 381 nt3.22□□□□□ -1.89
ROT1Q03691 YHL006W-AYHL006W-A 354 nt3.22□□□□□ -1.89
ROT1Q03691 YJL150WYJL150W 303 nt3.22□□□□□ -1.89
ROT1Q03691 YMR172C-AYMR172C-A 384 nt3.22□□□□□ -1.89
ROT1Q03691 NUP82YJL061W 2142 nt3.22□□□□□ -1.89
ROT1Q03691 CDH1YGL003C 1701 nt3.22□□□□□ -1.89
ROT1Q03691 YPK1YKL126W 2043 nt3.21□□□□□ -1.9
ROT1Q03691 GSC2YGR032W 5688 nt3.21□□□□□ -1.9
ROT1Q03691 RPL32YBL092W 393 nt3.21□□□□□ -1.9
ROT1Q03691 YOR302WYOR302W 78 nt3.21□□□□□ -1.9
ROT1Q03691 RPS23BYPR132W 438 nt3.21□□□□□ -1.9
ROT1Q03691 APL4YPR029C 2499 nt3.21□□□□□ -1.9
ROT1Q03691 CDC24YAL041W 2565 nt3.21□□□□□ -1.9
ROT1Q03691 BNA4YBL098W 1383 nt3.21□□□□□ -1.9
ROT1Q03691 STN1YDR082W 1485 nt3.21□□□□□ -1.9
ROT1Q03691 MDN1YLR106C 14733 nt3.21□□□□□ -1.9
ROT1Q03691 RIM20YOR275C 1986 nt3.2□□□□□ -1.9
ROT1Q03691 PHO81YGR233C 3537 nt3.2□□□□□ -1.9
ROT1Q03691 tC(GCA)BtC(GCA)B 72 nt3.2□□□□□ -1.9
ROT1Q03691 tC(GCA)GtC(GCA)G 72 nt3.2□□□□□ -1.9
ROT1Q03691 tC(GCA)P1tC(GCA)P1 72 nt3.2□□□□□ -1.9
ROT1Q03691 tC(GCA)P2tC(GCA)P2 72 nt3.2□□□□□ -1.9
ROT1Q03691 LSM1YJL124C 519 nt3.2□□□□□ -1.9
ROT1Q03691 CCW14YLR390W-A 717 nt3.2□□□□□ -1.9
ROT1Q03691 RSM19YNR037C 276 nt3.2□□□□□ -1.9
ROT1Q03691 ATP15YPL271W 189 nt3.2□□□□□ -1.9
ROT1Q03691 ATP25YMR098C 1839 nt3.2□□□□□ -1.9
ROT1Q03691 GYL1YMR192W 2163 nt3.19□□□□□ -1.9
ROT1Q03691 KIP3YGL216W 2418 nt3.19□□□□□ -1.9
ROT1Q03691 YER088C-AYER088C-A 324 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)DtK(UUU)D 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)G1tK(UUU)G1 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)G2tK(UUU)G2 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)KtK(UUU)K 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)LtK(UUU)L 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)OtK(UUU)O 73 nt3.19□□□□□ -1.9
ROT1Q03691 tK(UUU)PtK(UUU)P 73 nt3.19□□□□□ -1.9
ROT1Q03691 RPS7AYOR096W 573 nt3.19□□□□□ -1.9
ROT1Q03691 YPR108W-AYPR108W-A 213 nt3.19□□□□□ -1.9
ROT1Q03691 PRP39YML046W 1890 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms