Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.56■■□□□ 1.2
PMS1P54277 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.56■■□□□ 1.2
PMS1P54277 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.55■■□□□ 1.2
PMS1P54277 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.55■■□□□ 1.2
PMS1P54277 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PMS1P54277 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PMS1P54277 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.55■■□□□ 1.2
PMS1P54277 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.55■■□□□ 1.2
PMS1P54277 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 MIR6821-201ENST00000617625 74 ntBASIC22.55■■□□□ 1.2
PMS1P54277 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PMS1P54277 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PMS1P54277 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMS1P54277 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PMS1P54277 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.54■■□□□ 1.2
PMS1P54277 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.54■■□□□ 1.2
PMS1P54277 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMS1P54277 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PMS1P54277 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PMS1P54277 AC092720.2-201ENST00000602388 1665 ntBASIC22.53■■□□□ 1.2
PMS1P54277 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PMS1P54277 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PMS1P54277 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PMS1P54277 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.53■■□□□ 1.2
PMS1P54277 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
PMS1P54277 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PMS1P54277 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.53■■□□□ 1.2
PMS1P54277 MYCNOS-205ENST00000641950 531 ntBASIC22.53■■□□□ 1.2
PMS1P54277 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PMS1P54277 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.53■■□□□ 1.2
PMS1P54277 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PMS1P54277 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 AC034268.1-201ENST00000441047 882 ntBASIC22.52■■□□□ 1.2
PMS1P54277 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.52■■□□□ 1.2
PMS1P54277 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.52■■□□□ 1.2
PMS1P54277 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PMS1P54277 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PMS1P54277 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PMS1P54277 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PMS1P54277 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.52■■□□□ 1.2
PMS1P54277 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PMS1P54277 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.51■■□□□ 1.19
PMS1P54277 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.51■■□□□ 1.19
PMS1P54277 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.51■■□□□ 1.19
PMS1P54277 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.51■■□□□ 1.19
PMS1P54277 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.51■■□□□ 1.19
PMS1P54277 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.51■■□□□ 1.19
PMS1P54277 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.51■■□□□ 1.19
PMS1P54277 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMS1P54277 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.5■■□□□ 1.19
PMS1P54277 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.5■■□□□ 1.19
PMS1P54277 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PMS1P54277 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.5■■□□□ 1.19
PMS1P54277 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.5■■□□□ 1.19
PMS1P54277 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PMS1P54277 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.5■■□□□ 1.19
PMS1P54277 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.5■■□□□ 1.19
PMS1P54277 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.5■■□□□ 1.19
PMS1P54277 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 PKD1P6-201ENST00000343738 4769 ntBASIC22.5■■□□□ 1.19
PMS1P54277 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PMS1P54277 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.5■■□□□ 1.19
PMS1P54277 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMS1P54277 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMS1P54277 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms