Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 YDR169C-AYDR169C-A 150 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)DtK(UUU)D 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)G1tK(UUU)G1 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)G2tK(UUU)G2 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)KtK(UUU)K 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)LtK(UUU)L 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)OtK(UUU)O 73 nt3.7□□□□□ -1.82
VPS35P34110 tK(UUU)PtK(UUU)P 73 nt3.7□□□□□ -1.82
VPS35P34110 YFL065CYFL065C 309 nt3.7□□□□□ -1.82
VPS35P34110 YMR122W-AYMR122W-A 255 nt3.7□□□□□ -1.82
VPS35P34110 ETP1YHL010C 1758 nt3.7□□□□□ -1.82
VPS35P34110 GYP7YDL234C 2241 nt3.7□□□□□ -1.82
VPS35P34110 Q0032Q0032 291 nt3.69□□□□□ -1.82
VPS35P34110 YMR31YFR049W 372 nt3.69□□□□□ -1.82
VPS35P34110 YHR007C-AYHR007C-A 216 nt3.69□□□□□ -1.82
VPS35P34110 PSY1YKL076C 384 nt3.69□□□□□ -1.82
VPS35P34110 UTP30YKR060W 825 nt3.69□□□□□ -1.82
VPS35P34110 YPR108W-AYPR108W-A 213 nt3.69□□□□□ -1.82
VPS35P34110 YBR085C-AYBR085C-A 258 nt3.69□□□□□ -1.82
VPS35P34110 BRO1YPL084W 2535 nt3.68□□□□□ -1.82
VPS35P34110 YDL041WYDL041W 354 nt3.68□□□□□ -1.82
VPS35P34110 STE14YDR410C 720 nt3.68□□□□□ -1.82
VPS35P34110 tM(CAU)Q1tM(CAU)Q1 76 nt3.68□□□□□ -1.82
VPS35P34110 RPL22AYLR061W 366 nt3.68□□□□□ -1.82
VPS35P34110 RPL20BYOR312C 519 nt3.68□□□□□ -1.82
VPS35P34110 FUS1YCL027W 1539 nt3.68□□□□□ -1.82
VPS35P34110 NAN1YPL126W 2691 nt3.67□□□□□ -1.82
VPS35P34110 BMS1YPL217C 3552 nt3.67□□□□□ -1.82
VPS35P34110 TOM70YNL121C 1854 nt3.67□□□□□ -1.82
VPS35P34110 YDR210W-BYDR210W-B 5313 nt3.67□□□□□ -1.82
VPS35P34110 YDR261W-BYDR261W-B 5313 nt3.67□□□□□ -1.82
VPS35P34110 YFL002W-AYFL002W-A 5313 nt3.67□□□□□ -1.82
VPS35P34110 YGR161W-BYGR161W-B 5313 nt3.67□□□□□ -1.82
VPS35P34110 YLR410W-BYLR410W-B 5313 nt3.67□□□□□ -1.82
VPS35P34110 YCL019WYCL019W 5313 nt3.67□□□□□ -1.82
VPS35P34110 YDL011CYDL011C 324 nt3.67□□□□□ -1.82
VPS35P34110 tV(CAC)DtV(CAC)D 73 nt3.67□□□□□ -1.82
VPS35P34110 tV(CAC)HtV(CAC)H 73 nt3.67□□□□□ -1.82
VPS35P34110 HYR1YIR037W 492 nt3.67□□□□□ -1.82
VPS35P34110 YJL015CYJL015C 285 nt3.67□□□□□ -1.82
VPS35P34110 YKL033W-AYKL033W-A 711 nt3.67□□□□□ -1.82
VPS35P34110 YJL181WYJL181W 1836 nt3.67□□□□□ -1.82
VPS35P34110 ZDS2YML109W 2829 nt3.66□□□□□ -1.82
VPS35P34110 SIZ1YDR409W 2715 nt3.66□□□□□ -1.82
VPS35P34110 RKM1YPL208W 1752 nt3.66□□□□□ -1.82
VPS35P34110 NOP4YPL043W 2058 nt3.66□□□□□ -1.82
VPS35P34110 ADK1YDR226W 669 nt3.66□□□□□ -1.82
VPS35P34110 DAD4YDR320C-A 219 nt3.66□□□□□ -1.82
VPS35P34110 WIP1YDR374W-A 270 nt3.66□□□□□ -1.82
VPS35P34110 MDV1YJL112W 2145 nt3.66□□□□□ -1.82
VPS35P34110 SHH3YMR118C 591 nt3.66□□□□□ -1.82
VPS35P34110 MSS11YMR164C 2277 nt3.66□□□□□ -1.82
VPS35P34110 EXO84YBR102C 2262 nt3.65□□□□□ -1.82
VPS35P34110 FLO9YAL063C 3969 nt3.65□□□□□ -1.82
VPS35P34110 SET1YHR119W 3243 nt3.65□□□□□ -1.82
VPS35P34110 DIA2YOR080W 2199 nt3.65□□□□□ -1.82
VPS35P34110 AST2YER101C 1293 nt3.65□□□□□ -1.83
VPS35P34110 YOP1YPR028W 543 nt3.65□□□□□ -1.83
VPS35P34110 BOI1YBL085W 2943 nt3.64□□□□□ -1.83
VPS35P34110 RPS18BYML026C 441 nt3.64□□□□□ -1.83
VPS35P34110 YOR073W-AYOR073W-A 234 nt3.64□□□□□ -1.83
VPS35P34110 snR51snR51 107 nt3.64□□□□□ -1.83
VPS35P34110 VPS41YDR080W 2979 nt3.64□□□□□ -1.83
VPS35P34110 BNA4YBL098W 1383 nt3.63□□□□□ -1.83
VPS35P34110 ANB1YJR047C 474 nt3.63□□□□□ -1.83
VPS35P34110 FLO5YHR211W 3228 nt3.63□□□□□ -1.83
VPS35P34110 SHQ1YIL104C 1524 nt3.63□□□□□ -1.83
VPS35P34110 MET10YFR030W 3108 nt3.63□□□□□ -1.83
VPS35P34110 FAR1YJL157C 2493 nt3.63□□□□□ -1.83
VPS35P34110 SMC3YJL074C 3693 nt3.63□□□□□ -1.83
VPS35P34110 YIL166CYIL166C 1629 nt3.62□□□□□ -1.83
VPS35P34110 MSR1YHR091C 1932 nt3.62□□□□□ -1.83
VPS35P34110 PRK1YIL095W 2433 nt3.62□□□□□ -1.83
VPS35P34110 snR79snR79 84 nt3.62□□□□□ -1.83
VPS35P34110 CYC7YEL039C 342 nt3.62□□□□□ -1.83
VPS35P34110 LCL2YLR104W 396 nt3.62□□□□□ -1.83
VPS35P34110 TMA10YLR327C 261 nt3.62□□□□□ -1.83
VPS35P34110 CDC24YAL041W 2565 nt3.62□□□□□ -1.83
VPS35P34110 KAP95YLR347C 2586 nt3.62□□□□□ -1.83
VPS35P34110 ECM25YJL201W 1800 nt3.62□□□□□ -1.83
VPS35P34110 IRC10YOL015W 1761 nt3.61□□□□□ -1.83
VPS35P34110 SSE1YPL106C 2082 nt3.61□□□□□ -1.83
VPS35P34110 RPL14BYHL001W 417 nt3.61□□□□□ -1.83
VPS35P34110 GPI14YJR013W 1212 nt3.61□□□□□ -1.83
VPS35P34110 YOR050CYOR050C 348 nt3.61□□□□□ -1.83
VPS35P34110 SKT5YBL061C 2091 nt3.61□□□□□ -1.83
VPS35P34110 REV1YOR346W 2958 nt3.6□□□□□ -1.83
VPS35P34110 TAR1YLR154W-C 375 nt3.6□□□□□ -1.83
VPS35P34110 YPL182CYPL182C 384 nt3.6□□□□□ -1.83
VPS35P34110 MGR1YCL044C 1254 nt3.6□□□□□ -1.83
VPS35P34110 RLF2YPR018W 1821 nt3.6□□□□□ -1.83
VPS35P34110 RPA190YOR341W 4995 nt3.6□□□□□ -1.83
VPS35P34110 YHR080CYHR080C 4038 nt3.6□□□□□ -1.83
VPS35P34110 PKH1YDR490C 2301 nt3.59□□□□□ -1.83
VPS35P34110 MZM1YDR493W 372 nt3.59□□□□□ -1.83
VPS35P34110 RPS24AYER074W 408 nt3.59□□□□□ -1.83
VPS35P34110 YGR174W-AYGR174W-A 87 nt3.59□□□□□ -1.83
VPS35P34110 YGR265WYGR265W 411 nt3.59□□□□□ -1.83
VPS35P34110 SMC2YFR031C 3513 nt3.59□□□□□ -1.84
VPS35P34110 OSW7YFR039C 1533 nt3.59□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 120.7 ms