Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YDR426CYDR426C 378 nt3.45□□□□□ -1.86
PUB1P32588 HPA3YEL066W 540 nt3.45□□□□□ -1.86
PUB1P32588 RPL36AYMR194W 303 nt3.45□□□□□ -1.86
PUB1P32588 HHT1YBR010W 411 nt3.45□□□□□ -1.86
PUB1P32588 YPL182CYPL182C 384 nt3.45□□□□□ -1.86
PUB1P32588 SPT23YKL020C 3249 nt3.45□□□□□ -1.86 RIP-Chip
PUB1P32588 YOL075CYOL075C 3885 nt3.44□□□□□ -1.86
PUB1P32588 ARG5,6YER069W 2592 nt3.44□□□□□ -1.86
PUB1P32588 SRL3YKR091W 741 nt3.44□□□□□ -1.86
PUB1P32588 CCW14YLR390W-A 717 nt3.44□□□□□ -1.86 RIP-Chip
PUB1P32588 SAR1YPL218W 573 nt3.44□□□□□ -1.86
PUB1P32588 UBP5YER144C 2418 nt3.44□□□□□ -1.86
PUB1P32588 TOF2YKR010C 2316 nt3.44□□□□□ -1.86
PUB1P32588 GIP4YAL031C 2283 nt3.44□□□□□ -1.86
PUB1P32588 SUP56tL(CAA)A 82 nt3.43□□□□□ -1.86
PUB1P32588 SUP53tL(CAA)C 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)DtL(CAA)D 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)G1tL(CAA)G1 82 nt3.43□□□□□ -1.86
PUB1P32588 SUP54tL(CAA)G2 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)G3tL(CAA)G3 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)KtL(CAA)K 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)LtL(CAA)L 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)MtL(CAA)M 82 nt3.43□□□□□ -1.86
PUB1P32588 tL(CAA)NtL(CAA)N 82 nt3.43□□□□□ -1.86
PUB1P32588 CSE2YNR010W 450 nt3.43□□□□□ -1.86
PUB1P32588 YBR131C-AYBR131C-A 90 nt3.43□□□□□ -1.86
PUB1P32588 USA1YML029W 2517 nt3.43□□□□□ -1.86
PUB1P32588 YGR250CYGR250C 2346 nt3.43□□□□□ -1.86 RIP-Chip
PUB1P32588 RSC3YDR303C 2658 nt3.43□□□□□ -1.86
PUB1P32588 RAD26YJR035W 3258 nt3.43□□□□□ -1.86
PUB1P32588 YGL074CYGL074C 327 nt3.42□□□□□ -1.86
PUB1P32588 HHF1YBR009C 312 nt3.42□□□□□ -1.86 RIP-Chip
PUB1P32588 YOR376WYOR376W 369 nt3.42□□□□□ -1.86
PUB1P32588 CWH43YCR017C 2862 nt3.42□□□□□ -1.86
PUB1P32588 APE2YKL157W 2859 nt3.42□□□□□ -1.86
PUB1P32588 TRM2YKR056W 1920 nt3.42□□□□□ -1.86
PUB1P32588 OAF3YKR064W 2592 nt3.42□□□□□ -1.86
PUB1P32588 HDA3YPR179C 1968 nt3.42□□□□□ -1.86
PUB1P32588 ARO80YDR421W 2853 nt3.41□□□□□ -1.86
PUB1P32588 PRM15YMR278W 1869 nt3.41□□□□□ -1.86
PUB1P32588 CWH41YGL027C 2502 nt3.41□□□□□ -1.86
PUB1P32588 YER077CYER077C 2067 nt3.41□□□□□ -1.86
PUB1P32588 HOS3YPL116W 2094 nt3.41□□□□□ -1.86 RIP-Chip
PUB1P32588 YGR051CYGR051C 324 nt3.41□□□□□ -1.86
PUB1P32588 YHL005CYHL005C 393 nt3.41□□□□□ -1.86
PUB1P32588 YHR210CYHR210C 1026 nt3.41□□□□□ -1.86
PUB1P32588 APC9YLR102C 798 nt3.41□□□□□ -1.86
PUB1P32588 MSS11YMR164C 2277 nt3.41□□□□□ -1.86 RIP-Chip
PUB1P32588 ALR2YFL050C 2577 nt3.41□□□□□ -1.86
PUB1P32588 PFK26YIL107C 2484 nt3.41□□□□□ -1.86
PUB1P32588 MCM7YBR202W 2538 nt3.4□□□□□ -1.86 RIP-Chip
PUB1P32588 SWA2YDR320C 2007 nt3.4□□□□□ -1.87
PUB1P32588 TSA2YDR453C 591 nt3.4□□□□□ -1.87
PUB1P32588 YHR032C-AYHR032C-A 120 nt3.4□□□□□ -1.87
PUB1P32588 NCE101YJL205C 162 nt3.4□□□□□ -1.87 RIP-Chip
PUB1P32588 YML037CYML037C 1023 nt3.4□□□□□ -1.87
PUB1P32588 LCB5YLR260W 2064 nt3.4□□□□□ -1.87 RIP-Chip
PUB1P32588 NOG1YPL093W 1944 nt3.4□□□□□ -1.87 RIP-Chip
PUB1P32588 ALO1YML086C 1581 nt3.39□□□□□ -1.87
PUB1P32588 SSY1YDR160W 2559 nt3.39□□□□□ -1.87
PUB1P32588 HBT1YDL223C 3141 nt3.39□□□□□ -1.87
PUB1P32588 SNU13YEL026W 381 nt3.39□□□□□ -1.87
PUB1P32588 YLR012CYLR012C 300 nt3.39□□□□□ -1.87
PUB1P32588 GOT1YMR292W 417 nt3.39□□□□□ -1.87 RIP-Chip
PUB1P32588 YOR161W-BYOR161W-B 261 nt3.39□□□□□ -1.87
PUB1P32588 ISU1YPL135W 498 nt3.39□□□□□ -1.87 RIP-Chip
PUB1P32588 YBR182C-AYBR182C-A 195 nt3.39□□□□□ -1.87
PUB1P32588 NUP133YKR082W 3474 nt3.39□□□□□ -1.87
PUB1P32588 ROD1YOR018W 2514 nt3.38□□□□□ -1.87
PUB1P32588 YDL041WYDL041W 354 nt3.38□□□□□ -1.87
PUB1P32588 NPC2YDL046W 522 nt3.38□□□□□ -1.87 RIP-Chip
PUB1P32588 YPR002C-AYPR002C-A 198 nt3.38□□□□□ -1.87
PUB1P32588 ABP140YOR239W 1887 nt3.38□□□□□ -1.87
PUB1P32588 NAM2YLR382C 2685 nt3.38□□□□□ -1.87
PUB1P32588 MDM20YOL076W 2391 nt3.38□□□□□ -1.87
PUB1P32588 CDC45YLR103C 1953 nt3.38□□□□□ -1.87
PUB1P32588 SLP1YOR154W 1764 nt3.38□□□□□ -1.87
PUB1P32588 TRK1YJL129C 3708 nt3.37□□□□□ -1.87
PUB1P32588 AIM21YIR003W 2040 nt3.37□□□□□ -1.87
PUB1P32588 OSH3YHR073W 2991 nt3.37□□□□□ -1.87
PUB1P32588 YJL222W-BYJL222W-B 138 nt3.37□□□□□ -1.87
PUB1P32588 RPS18BYML026C 441 nt3.37□□□□□ -1.87
PUB1P32588 MRPL33YMR286W 261 nt3.37□□□□□ -1.87
PUB1P32588 RPL23AYBL087C 414 nt3.37□□□□□ -1.87
PUB1P32588 DLS1YJL065C 504 nt3.36□□□□□ -1.87
PUB1P32588 YJR112W-AYJR112W-A 330 nt3.36□□□□□ -1.87
PUB1P32588 YKL162C-AYKL162C-A 153 nt3.36□□□□□ -1.87
PUB1P32588 YCL001W-BYCL001W-B 255 nt3.36□□□□□ -1.87
PUB1P32588 YBR184WYBR184W 1572 nt3.36□□□□□ -1.87
PUB1P32588 SEC5YDR166C 2916 nt3.36□□□□□ -1.87
PUB1P32588 JJJ2YJL162C 1752 nt3.35□□□□□ -1.87
PUB1P32588 HMG1YML075C 3165 nt3.35□□□□□ -1.87
PUB1P32588 PDE2YOR360C 1581 nt3.35□□□□□ -1.87 RIP-Chip
PUB1P32588 YIL166CYIL166C 1629 nt3.35□□□□□ -1.87
PUB1P32588 UPS1YLR193C 528 nt3.35□□□□□ -1.87 RIP-Chip
PUB1P32588 LDS2YOL047C 1071 nt3.35□□□□□ -1.87
PUB1P32588 FRE8YLR047C 2061 nt3.35□□□□□ -1.87
PUB1P32588 NUP82YJL061W 2142 nt3.35□□□□□ -1.87
PUB1P32588 GYP7YDL234C 2241 nt3.35□□□□□ -1.87
PUB1P32588 DAN4YJR151C 3486 nt3.35□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms