Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 DNM1YLL001W 2274 nt3.41□□□□□ -1.86
CDC48P25694 AAD16YFL057C 459 nt3.41□□□□□ -1.86
CDC48P25694 BAT1YHR208W 1182 nt3.41□□□□□ -1.86
CDC48P25694 SSN8YNL025C 972 nt3.41□□□□□ -1.86
CDC48P25694 YPR014CYPR014C 330 nt3.41□□□□□ -1.86
CDC48P25694 ROM1YGR070W 3468 nt3.4□□□□□ -1.86
CDC48P25694 HPA3YEL066W 540 nt3.4□□□□□ -1.87
CDC48P25694 VTC4YJL012C 2166 nt3.4□□□□□ -1.87
CDC48P25694 POL2YNL262W 6669 nt3.4□□□□□ -1.87
CDC48P25694 BIT61YJL058C 1632 nt3.4□□□□□ -1.87
CDC48P25694 NDD1YOR372C 1665 nt3.39□□□□□ -1.87
CDC48P25694 VPS3YDR495C 3036 nt3.39□□□□□ -1.87
CDC48P25694 HOP2YGL033W 657 nt3.39□□□□□ -1.87
CDC48P25694 URM1YIL008W 300 nt3.39□□□□□ -1.87
CDC48P25694 MSL1YIR009W 336 nt3.39□□□□□ -1.87
CDC48P25694 YJL202CYJL202C 348 nt3.39□□□□□ -1.87
CDC48P25694 snR36snR36 182 nt3.39□□□□□ -1.87
CDC48P25694 PDC2YDR081C 2778 nt3.39□□□□□ -1.87
CDC48P25694 SPP382YLR424W 2127 nt3.38□□□□□ -1.87
CDC48P25694 GIS4YML006C 2325 nt3.38□□□□□ -1.87
CDC48P25694 STE5YDR103W 2754 nt3.38□□□□□ -1.87
CDC48P25694 tW(UCA)QtW(UCA)Q 74 nt3.38□□□□□ -1.87
CDC48P25694 RPL39YJL189W 156 nt3.38□□□□□ -1.87
CDC48P25694 TIM8YJR135W-A 264 nt3.38□□□□□ -1.87
CDC48P25694 AIM32YML050W 936 nt3.38□□□□□ -1.87
CDC48P25694 YMR290W-AYMR290W-A 348 nt3.38□□□□□ -1.87
CDC48P25694 EGD1YPL037C 474 nt3.38□□□□□ -1.87
CDC48P25694 snR191snR191 274 nt3.38□□□□□ -1.87
CDC48P25694 STE23YLR389C 3084 nt3.38□□□□□ -1.87
CDC48P25694 ENA5YDR038C 3276 nt3.38□□□□□ -1.87
CDC48P25694 RGC1YPR115W 3252 nt3.37□□□□□ -1.87
CDC48P25694 TFB1YDR311W 1929 nt3.37□□□□□ -1.87
CDC48P25694 CDH1YGL003C 1701 nt3.37□□□□□ -1.87
CDC48P25694 tT(UGU)Q1tT(UGU)Q1 76 nt3.37□□□□□ -1.87
CDC48P25694 SHE2YKL130C 741 nt3.37□□□□□ -1.87
CDC48P25694 YLR154C-HYLR154C-H 132 nt3.37□□□□□ -1.87
CDC48P25694 YLR156C-AYLR156C-A 132 nt3.37□□□□□ -1.87
CDC48P25694 YLR157C-CYLR157C-C 132 nt3.37□□□□□ -1.87
CDC48P25694 YLR159C-AYLR159C-A 132 nt3.37□□□□□ -1.87
CDC48P25694 PAU14YIL176C 363 nt3.36□□□□□ -1.87
CDC48P25694 PAU1YJL223C 363 nt3.36□□□□□ -1.87
CDC48P25694 RPL8BYLL045C 771 nt3.36□□□□□ -1.87
CDC48P25694 RPS22BYLR367W 393 nt3.36□□□□□ -1.87
CDC48P25694 YPP1YGR198W 2454 nt3.36□□□□□ -1.87
CDC48P25694 RRM3YHR031C 2172 nt3.35□□□□□ -1.87
CDC48P25694 CAJ1YER048C 1176 nt3.35□□□□□ -1.87
CDC48P25694 PEX4YGR133W 552 nt3.35□□□□□ -1.87
CDC48P25694 YHL006W-AYHL006W-A 354 nt3.35□□□□□ -1.87
CDC48P25694 YHR063W-AYHR063W-A 336 nt3.35□□□□□ -1.87
CDC48P25694 YMR320WYMR320W 306 nt3.35□□□□□ -1.87
CDC48P25694 RMT2YDR465C 1239 nt3.34□□□□□ -1.87
CDC48P25694 YFR056CYFR056C 369 nt3.34□□□□□ -1.87
CDC48P25694 YKL033W-AYKL033W-A 711 nt3.34□□□□□ -1.87
CDC48P25694 YLR031WYLR031W 561 nt3.33□□□□□ -1.88
CDC48P25694 PGA1YNL158W 597 nt3.33□□□□□ -1.88
CDC48P25694 SWD3YBR175W 948 nt3.33□□□□□ -1.88
CDC48P25694 SSY1YDR160W 2559 nt3.33□□□□□ -1.88
CDC48P25694 COX1Q0045 1605 nt3.33□□□□□ -1.88
CDC48P25694 YHR078WYHR078W 1659 nt3.33□□□□□ -1.88
CDC48P25694 TFC1YBR123C 1950 nt3.32□□□□□ -1.88
CDC48P25694 KAP104YBR017C 2757 nt3.32□□□□□ -1.88
CDC48P25694 POL3YDL102W 3294 nt3.32□□□□□ -1.88
CDC48P25694 HMF1YER057C 390 nt3.32□□□□□ -1.88
CDC48P25694 RPL30YGL030W 318 nt3.32□□□□□ -1.88
CDC48P25694 tQ(UUG)BtQ(UUG)B 72 nt3.32□□□□□ -1.88
CDC48P25694 RPL9BYNL067W 576 nt3.32□□□□□ -1.88
CDC48P25694 YNL034WYNL034W 1839 nt3.32□□□□□ -1.88
CDC48P25694 MAK21YDR060W 3078 nt3.32□□□□□ -1.88
CDC48P25694 RIF1YBR275C 5751 nt3.31□□□□□ -1.88
CDC48P25694 YDR183C-AYDR183C-A 258 nt3.31□□□□□ -1.88
CDC48P25694 YBL073WYBL073W 312 nt3.31□□□□□ -1.88
CDC48P25694 IRC23YOR044W 474 nt3.31□□□□□ -1.88
CDC48P25694 RPS12YOR369C 432 nt3.31□□□□□ -1.88
CDC48P25694 SNQ2YDR011W 4506 nt3.31□□□□□ -1.88
CDC48P25694 SIP3YNL257C 3690 nt3.31□□□□□ -1.88
CDC48P25694 ROG1YGL144C 2058 nt3.31□□□□□ -1.88
CDC48P25694 FUN30YAL019W 3396 nt3.31□□□□□ -1.88
CDC48P25694 MET10YFR030W 3108 nt3.3□□□□□ -1.88
CDC48P25694 APC11YDL008W 498 nt3.3□□□□□ -1.88
CDC48P25694 DBP10YDL031W 2988 nt3.3□□□□□ -1.88
CDC48P25694 DYN2YDR424C 279 nt3.3□□□□□ -1.88
CDC48P25694 YIL058WYIL058W 285 nt3.3□□□□□ -1.88
CDC48P25694 MET5YJR137C 4329 nt3.3□□□□□ -1.88
CDC48P25694 TPS2YDR074W 2691 nt3.3□□□□□ -1.88
CDC48P25694 TOM70YNL121C 1854 nt3.3□□□□□ -1.88
CDC48P25694 YME2YMR302C 2553 nt3.3□□□□□ -1.88
CDC48P25694 YTA7YGR270W 4140 nt3.29□□□□□ -1.88
CDC48P25694 DIA2YOR080W 2199 nt3.29□□□□□ -1.88
CDC48P25694 YBP1YBR216C 2025 nt3.29□□□□□ -1.88
CDC48P25694 YDR034C-DYDR034C-D 5313 nt3.29□□□□□ -1.88
CDC48P25694 SMC2YFR031C 3513 nt3.29□□□□□ -1.88
CDC48P25694 NPR1YNL183C 2373 nt3.29□□□□□ -1.88
CDC48P25694 YER023C-AYER023C-A 213 nt3.29□□□□□ -1.88
CDC48P25694 NCE101YJL205C 162 nt3.29□□□□□ -1.88
CDC48P25694 PHD1YKL043W 1101 nt3.29□□□□□ -1.88
CDC48P25694 COX7YMR256C 183 nt3.29□□□□□ -1.88
CDC48P25694 ATP15YPL271W 189 nt3.29□□□□□ -1.88
CDC48P25694 FLO1YAR050W 4614 nt3.29□□□□□ -1.88
CDC48P25694 EXO84YBR102C 2262 nt3.28□□□□□ -1.88
CDC48P25694 BCH1YMR237W 2175 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms