Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 AC005181.1-201ENST00000604782 1256 ntBASIC17.91■□□□□ 0.46
CDH20Q9HBT6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 AC006970.2-201ENST00000450065 779 ntBASIC17.9■□□□□ 0.46
CDH20Q9HBT6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 AC069236.1-201ENST00000604339 616 ntBASIC17.9■□□□□ 0.46
CDH20Q9HBT6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH20Q9HBT6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH20Q9HBT6 AC121338.2-201ENST00000622535 1744 ntBASIC17.89■□□□□ 0.46
CDH20Q9HBT6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 MIR663A-201ENST00000385250 93 ntBASIC17.89■□□□□ 0.45
CDH20Q9HBT6 CYP2T1P-201ENST00000432607 1285 ntBASIC17.89■□□□□ 0.45
CDH20Q9HBT6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 AL162412.1-201ENST00000567129 965 ntBASIC17.89■□□□□ 0.45
CDH20Q9HBT6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH20Q9HBT6 AC068338.2-201ENST00000563278 1430 ntBASIC17.89■□□□□ 0.45
CDH20Q9HBT6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 AC005229.4-201ENST00000610085 2198 ntBASIC17.88■□□□□ 0.45
CDH20Q9HBT6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH20Q9HBT6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH20Q9HBT6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms