Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHCBP1LQ9BZQ2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHCBP1LQ9BZQ2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.23■□□□□ 0.83
SHCBP1LQ9BZQ2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.23■□□□□ 0.83
SHCBP1LQ9BZQ2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.23■□□□□ 0.83
SHCBP1LQ9BZQ2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHCBP1LQ9BZQ2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 AF213884.3-201ENST00000563833 479 ntBASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHCBP1LQ9BZQ2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
SHCBP1LQ9BZQ2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 MIR572-201ENST00000384983 95 ntBASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.2■□□□□ 0.82
SHCBP1LQ9BZQ2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 AL031432.3-201ENST00000607698 485 ntBASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHCBP1LQ9BZQ2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHCBP1LQ9BZQ2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms