Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 PDR11YIL013C 4236 nt2.36□□□□□ -2.03
RUP1Q12242 TOP2YNL088W 4287 nt2.36□□□□□ -2.03
RUP1Q12242 YDR210W-AYDR210W-A 1317 nt2.36□□□□□ -2.03
RUP1Q12242 GDI1YER136W 1356 nt2.36□□□□□ -2.03
RUP1Q12242 BUB1YGR188C 3066 nt2.35□□□□□ -2.03
RUP1Q12242 YCR064CYCR064C 411 nt2.35□□□□□ -2.03
RUP1Q12242 YCR108CYCR108C 192 nt2.35□□□□□ -2.03
RUP1Q12242 HRI1YLR301W 735 nt2.35□□□□□ -2.03
RUP1Q12242 YMR013C-AYMR013C-A 150 nt2.35□□□□□ -2.03
RUP1Q12242 PEX17YNL214W 600 nt2.35□□□□□ -2.03
RUP1Q12242 NSL1YPL233W 651 nt2.35□□□□□ -2.03
RUP1Q12242 ALG14YBR070C 714 nt2.35□□□□□ -2.03
RUP1Q12242 snR43snR43 209 nt2.35□□□□□ -2.03
RUP1Q12242 AMS1YGL156W 3252 nt2.34□□□□□ -2.03
RUP1Q12242 SDC25YLL016W 3147 nt2.34□□□□□ -2.03
RUP1Q12242 YIR020CYIR020C 303 nt2.34□□□□□ -2.03
RUP1Q12242 BET4YJL031C 984 nt2.34□□□□□ -2.03
RUP1Q12242 YOR364WYOR364W 369 nt2.34□□□□□ -2.03
RUP1Q12242 YPR145C-AYPR145C-A 237 nt2.34□□□□□ -2.03
RUP1Q12242 POM152YMR129W 4014 nt2.34□□□□□ -2.04
RUP1Q12242 YPP1YGR198W 2454 nt2.33□□□□□ -2.04
RUP1Q12242 SMY2YBR172C 2223 nt2.33□□□□□ -2.04
RUP1Q12242 RRP12YPL012W 3687 nt2.33□□□□□ -2.04
RUP1Q12242 YER119C-AYER119C-A 372 nt2.33□□□□□ -2.04
RUP1Q12242 YER189WYER189W 369 nt2.33□□□□□ -2.04
RUP1Q12242 EMC4YGL231C 573 nt2.33□□□□□ -2.04
RUP1Q12242 LRP1YHR081W 555 nt2.33□□□□□ -2.04
RUP1Q12242 RCN2YOR220W 798 nt2.33□□□□□ -2.04
RUP1Q12242 YPR096CYPR096C 303 nt2.33□□□□□ -2.04
RUP1Q12242 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
RUP1Q12242 YOL098CYOL098C 3114 nt2.33□□□□□ -2.04
RUP1Q12242 ORC2YBR060C 1863 nt2.33□□□□□ -2.04
RUP1Q12242 YDR186CYDR186C 2634 nt2.32□□□□□ -2.04
RUP1Q12242 MCD1YDL003W 1701 nt2.32□□□□□ -2.04
RUP1Q12242 RAD6YGL058W 519 nt2.32□□□□□ -2.04
RUP1Q12242 UBX4YMR067C 1251 nt2.32□□□□□ -2.04
RUP1Q12242 MEI5YPL121C 669 nt2.32□□□□□ -2.04
RUP1Q12242 PSK2YOL045W 3306 nt2.32□□□□□ -2.04
RUP1Q12242 ISW1YBR245C 3390 nt2.32□□□□□ -2.04
RUP1Q12242 SCD5YOR329C 2619 nt2.32□□□□□ -2.04
RUP1Q12242 STH1YIL126W 4080 nt2.31□□□□□ -2.04
RUP1Q12242 PSO2YMR137C 1986 nt2.31□□□□□ -2.04
RUP1Q12242 Q0144Q0144 330 nt2.31□□□□□ -2.04
RUP1Q12242 YIL156W-BYIL156W-B 222 nt2.31□□□□□ -2.04
RUP1Q12242 YJL202CYJL202C 348 nt2.31□□□□□ -2.04
RUP1Q12242 OSW7YFR039C 1533 nt2.31□□□□□ -2.04
RUP1Q12242 ASG1YIL130W 2895 nt2.31□□□□□ -2.04
RUP1Q12242 ECM5YMR176W 4236 nt2.31□□□□□ -2.04
RUP1Q12242 YEF3YLR249W 3135 nt2.31□□□□□ -2.04
RUP1Q12242 BNI1YNL271C 5862 nt2.3□□□□□ -2.04
RUP1Q12242 USO1YDL058W 5373 nt2.3□□□□□ -2.04
RUP1Q12242 HOS4YIL112W 3252 nt2.3□□□□□ -2.04
RUP1Q12242 SAK1YER129W 3429 nt2.3□□□□□ -2.04
RUP1Q12242 TOF1YNL273W 3717 nt2.3□□□□□ -2.04
RUP1Q12242 YER038W-AYER038W-A 381 nt2.3□□□□□ -2.04
RUP1Q12242 PEA2YER149C 1263 nt2.3□□□□□ -2.04
RUP1Q12242 PRM8YGL053W 714 nt2.3□□□□□ -2.04
RUP1Q12242 YIL029CYIL029C 429 nt2.3□□□□□ -2.04
RUP1Q12242 AIM32YML050W 936 nt2.3□□□□□ -2.04
RUP1Q12242 YMR320WYMR320W 306 nt2.3□□□□□ -2.04
RUP1Q12242 RPL36BYPL249C-A 303 nt2.3□□□□□ -2.04
RUP1Q12242 PHO2YDL106C 1680 nt2.3□□□□□ -2.04
RUP1Q12242 HRD3YLR207W 2502 nt2.3□□□□□ -2.04
RUP1Q12242 EDS1YBR033W 2760 nt2.3□□□□□ -2.04
RUP1Q12242 UBR1YGR184C 5853 nt2.3□□□□□ -2.04
RUP1Q12242 SSF1YHR066W 1362 nt2.29□□□□□ -2.04
RUP1Q12242 RNP1YLL046C 750 nt2.29□□□□□ -2.04
RUP1Q12242 RLP24YLR009W 600 nt2.29□□□□□ -2.04
RUP1Q12242 ARV1YLR242C 966 nt2.29□□□□□ -2.04
RUP1Q12242 SAP185YJL098W 3177 nt2.29□□□□□ -2.04
RUP1Q12242 INP51YIL002C 2841 nt2.29□□□□□ -2.04
RUP1Q12242 PHO91YNR013C 2685 nt2.29□□□□□ -2.04
RUP1Q12242 SGM1YJR134C 2124 nt2.29□□□□□ -2.04
RUP1Q12242 YJL181WYJL181W 1836 nt2.28□□□□□ -2.04
RUP1Q12242 SIR3YLR442C 2937 nt2.28□□□□□ -2.04
RUP1Q12242 SSD1YDR293C 3753 nt2.28□□□□□ -2.04
RUP1Q12242 snR84snR84 550 nt2.28□□□□□ -2.04
RUP1Q12242 TSA2YDR453C 591 nt2.28□□□□□ -2.04
RUP1Q12242 CHZ1YER030W 462 nt2.28□□□□□ -2.04
RUP1Q12242 RPS29AYLR388W 171 nt2.28□□□□□ -2.04
RUP1Q12242 YBR197CYBR197C 654 nt2.28□□□□□ -2.04
RUP1Q12242 SWA2YDR320C 2007 nt2.28□□□□□ -2.04
RUP1Q12242 SPP41YDR464W 4308 nt2.28□□□□□ -2.04
RUP1Q12242 SGS1YMR190C 4344 nt2.28□□□□□ -2.04
RUP1Q12242 YNL018CYNL018C 1839 nt2.28□□□□□ -2.04
RUP1Q12242 FAR11YNL127W 2862 nt2.28□□□□□ -2.05
RUP1Q12242 SSE1YPL106C 2082 nt2.27□□□□□ -2.05
RUP1Q12242 YMR045CYMR045C 5268 nt2.27□□□□□ -2.05
RUP1Q12242 RGA2YDR379W 3030 nt2.27□□□□□ -2.05
RUP1Q12242 YOR343W-AYOR343W-A 1317 nt2.27□□□□□ -2.05
RUP1Q12242 YDR250CYDR250C 276 nt2.27□□□□□ -2.05
RUP1Q12242 ACB1YGR037C 264 nt2.27□□□□□ -2.05
RUP1Q12242 AYR1YIL124W 894 nt2.27□□□□□ -2.05
RUP1Q12242 STE18YJR086W 333 nt2.27□□□□□ -2.05
RUP1Q12242 YAL059C-AYAL059C-A 423 nt2.27□□□□□ -2.05
RUP1Q12242 YLR252WYLR252W 306 nt2.27□□□□□ -2.05
RUP1Q12242 YNL146C-AYNL146C-A 195 nt2.27□□□□□ -2.05
RUP1Q12242 TMN3YER113C 2121 nt2.27□□□□□ -2.05
RUP1Q12242 SEC16YPL085W 6588 nt2.27□□□□□ -2.05
RUP1Q12242 SLN1YIL147C 3663 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 106 ms