Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.6■■□□□ 1.21
PMS1P54277 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.6■■□□□ 1.21
PMS1P54277 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.6■■□□□ 1.21
PMS1P54277 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PMS1P54277 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.6■■□□□ 1.21
PMS1P54277 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PMS1P54277 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PMS1P54277 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.6■■□□□ 1.21
PMS1P54277 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PMS1P54277 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PMS1P54277 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.59■■□□□ 1.21
PMS1P54277 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.59■■□□□ 1.21
PMS1P54277 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
PMS1P54277 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PMS1P54277 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 AC097381.1-201ENST00000429019 1296 ntBASIC22.59■■□□□ 1.21
PMS1P54277 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.59■■□□□ 1.21
PMS1P54277 SLC7A5P1-201ENST00000568957 537 ntBASIC22.59■■□□□ 1.21
PMS1P54277 AC087623.3-201ENST00000607047 1098 ntBASIC22.59■■□□□ 1.21
PMS1P54277 AC243732.1-201ENST00000612648 864 ntBASIC22.59■■□□□ 1.21
PMS1P54277 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.59■■□□□ 1.21
PMS1P54277 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PMS1P54277 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
PMS1P54277 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PMS1P54277 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PMS1P54277 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.58■■□□□ 1.21
PMS1P54277 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.58■■□□□ 1.21
PMS1P54277 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.58■■□□□ 1.21
PMS1P54277 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PMS1P54277 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PMS1P54277 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PMS1P54277 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.58■■□□□ 1.21
PMS1P54277 KRT19P1-201ENST00000405746 1186 ntBASIC22.58■■□□□ 1.21
PMS1P54277 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.58■■□□□ 1.21
PMS1P54277 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.58■■□□□ 1.21
PMS1P54277 MIR2861-201ENST00000636310 90 ntBASIC22.58■■□□□ 1.21
PMS1P54277 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PMS1P54277 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PMS1P54277 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.58■■□□□ 1.2
PMS1P54277 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.58■■□□□ 1.2
PMS1P54277 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.58■■□□□ 1.2
PMS1P54277 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.57■■□□□ 1.2
PMS1P54277 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PMS1P54277 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
PMS1P54277 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PMS1P54277 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.57■■□□□ 1.2
PMS1P54277 NTF6G-201ENST00000591094 616 ntBASIC22.57■■□□□ 1.2
PMS1P54277 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
PMS1P54277 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.57■■□□□ 1.2
PMS1P54277 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 AC099778.1-201ENST00000568593 1911 ntBASIC22.57■■□□□ 1.2
PMS1P54277 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMS1P54277 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PMS1P54277 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
PMS1P54277 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.56■■□□□ 1.2
PMS1P54277 AFG3L1P-217ENST00000557444 2447 ntBASIC22.56■■□□□ 1.2
PMS1P54277 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.56■■□□□ 1.2
PMS1P54277 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
PMS1P54277 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PMS1P54277 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.56■■□□□ 1.2
PMS1P54277 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.56■■□□□ 1.2
PMS1P54277 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMS1P54277 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms