Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00271P0C7V0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 PRKY-204ENST00000533551 1019 ntBASIC21.9■■□□□ 1.1
LINC00271P0C7V0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00271P0C7V0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
LINC00271P0C7V0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 AL353708.3-201ENST00000610272 989 ntBASIC21.89■■□□□ 1.09
LINC00271P0C7V0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00271P0C7V0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 C9orf163-202ENST00000624034 2573 ntBASIC21.88■■□□□ 1.09
LINC00271P0C7V0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00271P0C7V0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 AL356652.1-201ENST00000615962 565 ntBASIC21.87■■□□□ 1.09
LINC00271P0C7V0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00271P0C7V0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.86■■□□□ 1.09
LINC00271P0C7V0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.86■■□□□ 1.09
LINC00271P0C7V0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms