Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL031602.1-201ENST00000633169 911 ntBASIC17.93■□□□□ 0.46
UPK1BO75841 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK1BO75841 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UPK1BO75841 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.93■□□□□ 0.46
UPK1BO75841 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
UPK1BO75841 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
UPK1BO75841 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.93■□□□□ 0.46
UPK1BO75841 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1BO75841 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.92■□□□□ 0.46
UPK1BO75841 MIR6765-201ENST00000614092 87 ntBASIC17.92■□□□□ 0.46
UPK1BO75841 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1BO75841 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
UPK1BO75841 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.92■□□□□ 0.46
UPK1BO75841 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPK1BO75841 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UPK1BO75841 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UPK1BO75841 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
UPK1BO75841 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1BO75841 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1BO75841 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.91■□□□□ 0.46
UPK1BO75841 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.91■□□□□ 0.46
UPK1BO75841 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UPK1BO75841 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1BO75841 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1BO75841 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
UPK1BO75841 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPK1BO75841 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UPK1BO75841 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UPK1BO75841 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1BO75841 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPK1BO75841 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1BO75841 AC016575.1-201ENST00000607026 382 ntBASIC17.9■□□□□ 0.46
UPK1BO75841 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 Z82202.1-201ENST00000623446 1880 ntBASIC17.9■□□□□ 0.46
UPK1BO75841 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1BO75841 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1BO75841 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPK1BO75841 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPK1BO75841 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
UPK1BO75841 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK1BO75841 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
UPK1BO75841 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.89■□□□□ 0.45
UPK1BO75841 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
UPK1BO75841 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UPK1BO75841 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 AC120024.1-201ENST00000562672 995 ntBASIC17.89■□□□□ 0.45
UPK1BO75841 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
UPK1BO75841 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK1BO75841 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UPK1BO75841 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK1BO75841 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1BO75841 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK1BO75841 AC079598.2-202ENST00000546624 1451 ntBASIC17.88■□□□□ 0.45
UPK1BO75841 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms