Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YIL166CYIL166C 1629 nt1.9□□□□□ -2.11
RRP40Q08285 SNU114YKL173W 3027 nt1.9□□□□□ -2.11
RRP40Q08285 RAV1YJR033C 4074 nt1.9□□□□□ -2.11
RRP40Q08285 KAR1YNL188W 1302 nt1.9□□□□□ -2.11
RRP40Q08285 PRP6YBR055C 2700 nt1.89□□□□□ -2.11
RRP40Q08285 HSE1YHL002W 1359 nt1.89□□□□□ -2.11
RRP40Q08285 DAL5YJR152W 1632 nt1.89□□□□□ -2.11
RRP40Q08285 YCR108CYCR108C 192 nt1.89□□□□□ -2.11
RRP40Q08285 RAV2YDR202C 1056 nt1.89□□□□□ -2.11
RRP40Q08285 YEL057CYEL057C 702 nt1.89□□□□□ -2.11
RRP40Q08285 AIM19YIL087C 474 nt1.89□□□□□ -2.11
RRP40Q08285 YIR021W-AYIR021W-A 213 nt1.89□□□□□ -2.11
RRP40Q08285 GIS1YDR096W 2685 nt1.89□□□□□ -2.11
RRP40Q08285 MYO2YOR326W 4725 nt1.89□□□□□ -2.11
RRP40Q08285 GDI1YER136W 1356 nt1.88□□□□□ -2.11
RRP40Q08285 YDR203WYDR203W 318 nt1.88□□□□□ -2.11
RRP40Q08285 TPK3YKL166C 1197 nt1.88□□□□□ -2.11
RRP40Q08285 YLR154W-AYLR154W-A 186 nt1.88□□□□□ -2.11
RRP40Q08285 GPN3YLR243W 819 nt1.88□□□□□ -2.11
RRP40Q08285 CIN2YPL241C 807 nt1.88□□□□□ -2.11
RRP40Q08285 YPR145C-AYPR145C-A 237 nt1.88□□□□□ -2.11
RRP40Q08285 NPR1YNL183C 2373 nt1.88□□□□□ -2.11
RRP40Q08285 IRC20YLR247C 4671 nt1.88□□□□□ -2.11
RRP40Q08285 YEL043WYEL043W 2871 nt1.88□□□□□ -2.11
RRP40Q08285 LST4YKL176C 2487 nt1.88□□□□□ -2.11
RRP40Q08285 MRPL32YCR003W 552 nt1.87□□□□□ -2.11
RRP40Q08285 PIB1YDR313C 861 nt1.87□□□□□ -2.11
RRP40Q08285 YER172C-AYER172C-A 381 nt1.87□□□□□ -2.11
RRP40Q08285 GEP7YGL057C 864 nt1.87□□□□□ -2.11
RRP40Q08285 YHR052W-AYHR052W-A 195 nt1.87□□□□□ -2.11
RRP40Q08285 YHR054W-AYHR054W-A 195 nt1.87□□□□□ -2.11
RRP40Q08285 SUI2YJR007W 915 nt1.87□□□□□ -2.11
RRP40Q08285 POL32YJR043C 1053 nt1.87□□□□□ -2.11
RRP40Q08285 IGO1YNL157W 507 nt1.87□□□□□ -2.11
RRP40Q08285 MGE1YOR232W 687 nt1.87□□□□□ -2.11
RRP40Q08285 RRP12YPL012W 3687 nt1.87□□□□□ -2.11
RRP40Q08285 YBR051WYBR051W 351 nt1.87□□□□□ -2.11
RRP40Q08285 YBR062CYBR062C 543 nt1.87□□□□□ -2.11
RRP40Q08285 RAD18YCR066W 1464 nt1.87□□□□□ -2.11
RRP40Q08285 CTF13YMR094W 1437 nt1.86□□□□□ -2.11
RRP40Q08285 ATP16YDL004W 483 nt1.86□□□□□ -2.11
RRP40Q08285 NSE4YDL105W 1209 nt1.86□□□□□ -2.11
RRP40Q08285 HTB1YDR224C 396 nt1.86□□□□□ -2.11
RRP40Q08285 RPS17BYDR447C 411 nt1.86□□□□□ -2.11
RRP40Q08285 RMD6YEL072W 696 nt1.86□□□□□ -2.11
RRP40Q08285 YJL156W-AYJL156W-A 222 nt1.86□□□□□ -2.11
RRP40Q08285 RPF2YKR081C 1035 nt1.86□□□□□ -2.11
RRP40Q08285 CCW14YLR390W-A 717 nt1.86□□□□□ -2.11
RRP40Q08285 YOL038C-AYOL038C-A 96 nt1.86□□□□□ -2.11
RRP40Q08285 YOL085W-AYOL085W-A 213 nt1.86□□□□□ -2.11
RRP40Q08285 YPR089WYPR089W 2667 nt1.86□□□□□ -2.11
RRP40Q08285 UTP5YDR398W 1932 nt1.85□□□□□ -2.11
RRP40Q08285 UBP1YDL122W 2430 nt1.85□□□□□ -2.11
RRP40Q08285 YDL118WYDL118W 381 nt1.85□□□□□ -2.11
RRP40Q08285 COX6YHR051W 447 nt1.85□□□□□ -2.11
RRP40Q08285 YIR018C-AYIR018C-A 138 nt1.85□□□□□ -2.11
RRP40Q08285 YBL012CYBL012C 402 nt1.85□□□□□ -2.11
RRP40Q08285 ARL1YBR164C 552 nt1.85□□□□□ -2.11
RRP40Q08285 SSY1YDR160W 2559 nt1.85□□□□□ -2.11
RRP40Q08285 VPS16YPL045W 2397 nt1.85□□□□□ -2.11
RRP40Q08285 ATG11YPR049C 3537 nt1.84□□□□□ -2.11
RRP40Q08285 PSK2YOL045W 3306 nt1.84□□□□□ -2.11
RRP40Q08285 SLS1YLR139C 1932 nt1.84□□□□□ -2.11
RRP40Q08285 YLR224WYLR224W 1110 nt1.84□□□□□ -2.11
RRP40Q08285 COX8YLR395C 237 nt1.84□□□□□ -2.11
RRP40Q08285 ARR2YPR200C 393 nt1.84□□□□□ -2.11
RRP40Q08285 YBR197CYBR197C 654 nt1.84□□□□□ -2.11
RRP40Q08285 YBR277CYBR277C 402 nt1.84□□□□□ -2.11
RRP40Q08285 YCL007CYCL007C 393 nt1.84□□□□□ -2.11
RRP40Q08285 GIP3YPL137C 3831 nt1.84□□□□□ -2.12
RRP40Q08285 PRK1YIL095W 2433 nt1.83□□□□□ -2.12
RRP40Q08285 SET2YJL168C 2202 nt1.83□□□□□ -2.12
RRP40Q08285 CAJ1YER048C 1176 nt1.83□□□□□ -2.12
RRP40Q08285 STE2YFL026W 1296 nt1.83□□□□□ -2.12
RRP40Q08285 THG1YGR024C 714 nt1.83□□□□□ -2.12
RRP40Q08285 PRP38YGR075C 729 nt1.83□□□□□ -2.12
RRP40Q08285 EST3YIL009C-A 546 nt1.83□□□□□ -2.12
RRP40Q08285 MIX23YBL107C 591 nt1.83□□□□□ -2.12
RRP40Q08285 SRL4YPL033C 846 nt1.83□□□□□ -2.12
RRP40Q08285 TRM7YBR061C 933 nt1.83□□□□□ -2.12
RRP40Q08285 AME1YBR211C 975 nt1.83□□□□□ -2.12
RRP40Q08285 BAS1YKR099W 2436 nt1.83□□□□□ -2.12
RRP40Q08285 GAL80YML051W 1308 nt1.83□□□□□ -2.12
RRP40Q08285 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
RRP40Q08285 PSO2YMR137C 1986 nt1.82□□□□□ -2.12
RRP40Q08285 YPS5YGL259W 498 nt1.82□□□□□ -2.12
RRP40Q08285 YMR173W-AYMR173W-A 1185 nt1.82□□□□□ -2.12
RRP40Q08285 GCN2YDR283C 4980 nt1.82□□□□□ -2.12
RRP40Q08285 MYO4YAL029C 4416 nt1.82□□□□□ -2.12
RRP40Q08285 CHC1YGL206C 4962 nt1.82□□□□□ -2.12
RRP40Q08285 YMR045CYMR045C 5268 nt1.81□□□□□ -2.12
RRP40Q08285 YCR013CYCR013C 648 nt1.81□□□□□ -2.12
RRP40Q08285 VMA7YGR020C 357 nt1.81□□□□□ -2.12
RRP40Q08285 YMR144WYMR144W 1029 nt1.81□□□□□ -2.12
RRP40Q08285 VTI1YMR197C 654 nt1.81□□□□□ -2.12
RRP40Q08285 DIS3YOL021C 3006 nt1.81□□□□□ -2.12
RRP40Q08285 MSL5YLR116W 1431 nt1.81□□□□□ -2.12
RRP40Q08285 MPH1YIR002C 2982 nt1.8□□□□□ -2.12
RRP40Q08285 PES4YFR023W 1836 nt1.8□□□□□ -2.12
RRP40Q08285 SIR4YDR227W 4077 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms