Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 CDC36YDL165W 576 nt1.11□□□□□ -2.23
TY1B-JR1P47098 URM1YIL008W 300 nt1.11□□□□□ -2.23
TY1B-JR1P47098 YDR098C-AYDR098C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YDR210C-CYDR210C-C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YDR261C-CYDR261C-C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YDR316W-AYDR316W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 ATP22YDR350C 2055 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YDR365W-AYDR365W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YER137C-AYER137C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YER159C-AYER159C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YGR027W-AYGR027W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YGR038C-AYGR038C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YGR161C-CYGR161C-C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YJR026WYJR026W 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YJR028WYJR028W 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YAR010CYAR010C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YLR157C-AYLR157C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YLR227W-AYLR227W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YLR256W-AYLR256W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YML040WYML040W 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YML045W-AYML045W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YMR051CYMR051C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 MTG1YMR097C 1104 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YNL054W-AYNL054W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YNL284C-AYNL284C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YOL103W-AYOL103W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YBR012W-AYBR012W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YOR142W-AYOR142W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 HNT3YOR258W 654 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YPL257W-AYPL257W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YPR137C-AYPR137C-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YPR158C-CYPR158C-C 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 YPR158W-AYPR158W-A 1323 nt1.1□□□□□ -2.23
TY1B-JR1P47098 NPL6YMR091C 1308 nt1.09□□□□□ -2.23
TY1B-JR1P47098 RPS17BYDR447C 411 nt1.09□□□□□ -2.23
TY1B-JR1P47098 TFA2YKR062W 987 nt1.09□□□□□ -2.23
TY1B-JR1P47098 SKO1YNL167C 1944 nt1.08□□□□□ -2.24
TY1B-JR1P47098 RSR1YGR152C 819 nt1.08□□□□□ -2.24
TY1B-JR1P47098 EBP2YKL172W 1284 nt1.08□□□□□ -2.24
TY1B-JR1P47098 YNL184CYNL184C 327 nt1.08□□□□□ -2.24
TY1B-JR1P47098 YLR108CYLR108C 1458 nt1.08□□□□□ -2.24
TY1B-JR1P47098 AAH1YNL141W 1044 nt1.08□□□□□ -2.24
TY1B-JR1P47098 YTH1YPR107C 627 nt1.08□□□□□ -2.24
TY1B-JR1P47098 LEU3YLR451W 2661 nt1.07□□□□□ -2.24
TY1B-JR1P47098 SET3YKR029C 2256 nt1.07□□□□□ -2.24
TY1B-JR1P47098 YBR138CYBR138C 1575 nt1.07□□□□□ -2.24
TY1B-JR1P47098 APL3YBL037W 3078 nt1.07□□□□□ -2.24
TY1B-JR1P47098 APL1YJR005W 2103 nt1.07□□□□□ -2.24
TY1B-JR1P47098 SEC4YFL005W 648 nt1.06□□□□□ -2.24
TY1B-JR1P47098 RIO2YNL207W 1278 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YOL035CYOL035C 303 nt1.06□□□□□ -2.24
TY1B-JR1P47098 CAT2YML042W 2013 nt1.06□□□□□ -2.24
TY1B-JR1P47098 TFB1YDR311W 1929 nt1.06□□□□□ -2.24
TY1B-JR1P47098 MNL2YLR057W 2550 nt1.06□□□□□ -2.24
TY1B-JR1P47098 RPL16AYIL133C 600 nt1.06□□□□□ -2.24
TY1B-JR1P47098 PET130YJL023C 1044 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YJL133C-AYJL133C-A 225 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YKL069WYKL069W 543 nt1.06□□□□□ -2.24
TY1B-JR1P47098 HUB1YNR032C-A 222 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YOR082CYOR082C 342 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YPL073CYPL073C 486 nt1.06□□□□□ -2.24
TY1B-JR1P47098 YGL262WYGL262W 528 nt1.05□□□□□ -2.24
TY1B-JR1P47098 SRP1YNL189W 1629 nt1.05□□□□□ -2.24
TY1B-JR1P47098 SPR3YGR059W 1539 nt1.04□□□□□ -2.24
TY1B-JR1P47098 PIN4YBL051C 2007 nt1.04□□□□□ -2.24
TY1B-JR1P47098 MCR1YKL150W 909 nt1.04□□□□□ -2.24
TY1B-JR1P47098 TBS1YBR150C 3285 nt1.04□□□□□ -2.24
TY1B-JR1P47098 YCS4YLR272C 3531 nt1.04□□□□□ -2.24
TY1B-JR1P47098 YER066C-AYER066C-A 501 nt1.03□□□□□ -2.24
TY1B-JR1P47098 YOR263CYOR263C 408 nt1.03□□□□□ -2.24
TY1B-JR1P47098 MUS81YDR386W 1899 nt1.03□□□□□ -2.24
TY1B-JR1P47098 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
TY1B-JR1P47098 YCL068CYCL068C 783 nt1.03□□□□□ -2.24
TY1B-JR1P47098 TIM11YDR322C-A 291 nt1.03□□□□□ -2.24
TY1B-JR1P47098 YKL156C-AYKL156C-A 117 nt1.03□□□□□ -2.24
TY1B-JR1P47098 HRT3YLR097C 1035 nt1.03□□□□□ -2.24
TY1B-JR1P47098 SPC29YPL124W 762 nt1.03□□□□□ -2.24
TY1B-JR1P47098 KAP120YPL125W 3099 nt1.02□□□□□ -2.25
TY1B-JR1P47098 AI1Q0050 2505 nt1.02□□□□□ -2.25
TY1B-JR1P47098 YCR007CYCR007C 720 nt1.02□□□□□ -2.25
TY1B-JR1P47098 YGR109W-AYGR109W-A 873 nt1.02□□□□□ -2.25
TY1B-JR1P47098 YIL082WYIL082W 873 nt1.02□□□□□ -2.25
TY1B-JR1P47098 YLR140WYLR140W 327 nt1.02□□□□□ -2.25
TY1B-JR1P47098 STN1YDR082W 1485 nt1.01□□□□□ -2.25
TY1B-JR1P47098 CDC10YCR002C 969 nt1.01□□□□□ -2.25
TY1B-JR1P47098 NOP19YGR251W 591 nt1.01□□□□□ -2.25
TY1B-JR1P47098 YIL058WYIL058W 285 nt1.01□□□□□ -2.25
TY1B-JR1P47098 APD1YBR151W 951 nt1.01□□□□□ -2.25
TY1B-JR1P47098 RED1YLR263W 2484 nt1□□□□□ -2.25
TY1B-JR1P47098 MAL33YBR297W 1407 nt1□□□□□ -2.25
TY1B-JR1P47098 YJL202CYJL202C 348 nt1□□□□□ -2.25
TY1B-JR1P47098 YOR343W-BYOR343W-B 5313 nt0.99□□□□□ -2.25
TY1B-JR1P47098 ERD2YBL040C 660 nt0.99□□□□□ -2.25
TY1B-JR1P47098 MGE1YOR232W 687 nt0.99□□□□□ -2.25
TY1B-JR1P47098 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
TY1B-JR1P47098 YNL284C-BYNL284C-B 5268 nt0.99□□□□□ -2.25
TY1B-JR1P47098 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
TY1B-JR1P47098 YPR148CYPR148C 1308 nt0.99□□□□□ -2.25
TY1B-JR1P47098 STE5YDR103W 2754 nt0.99□□□□□ -2.25
TY1B-JR1P47098 YDR124WYDR124W 975 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms