Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	PET191	YJR034W	327 nt		3.28	□□□□□ -1.88
CAF16	P43569	RPL40B	YKR094C	387 nt		3.28	□□□□□ -1.88
CAF16	P43569	TOM70	YNL121C	1854 nt		3.28	□□□□□ -1.88
CAF16	P43569	FUS1	YCL027W	1539 nt		3.28	□□□□□ -1.88
CAF16	P43569	SPA2	YLL021W	4401 nt		3.27	□□□□□ -1.89
CAF16	P43569	MKT1	YNL085W	2493 nt		3.27	□□□□□ -1.89
CAF16	P43569	DIE2	YGR227W	1578 nt		3.27	□□□□□ -1.89
CAF16	P43569	HPA3	YEL066W	540 nt		3.27	□□□□□ -1.89
CAF16	P43569	YGR035C	YGR035C	351 nt		3.27	□□□□□ -1.89
CAF16	P43569	SGN1	YIR001C	753 nt		3.27	□□□□□ -1.89
CAF16	P43569	RPL19B	YBL027W	570 nt		3.27	□□□□□ -1.89
CAF16	P43569	SHH3	YMR118C	591 nt		3.27	□□□□□ -1.89
CAF16	P43569	ICY1	YMR195W	384 nt		3.27	□□□□□ -1.89
CAF16	P43569	YNL057W	YNL057W	333 nt		3.27	□□□□□ -1.89
CAF16	P43569	YOL159C-A	YOL159C-A	273 nt		3.27	□□□□□ -1.89
CAF16	P43569	YOR121C	YOR121C	306 nt		3.27	□□□□□ -1.89
CAF16	P43569	LEU3	YLR451W	2661 nt		3.27	□□□□□ -1.89
CAF16	P43569	YNL034W	YNL034W	1839 nt		3.27	□□□□□ -1.89
CAF16	P43569	YSW1	YBR148W	1830 nt		3.27	□□□□□ -1.89
CAF16	P43569	MET10	YFR030W	3108 nt		3.27	□□□□□ -1.89
CAF16	P43569	NDD1	YOR372C	1665 nt		3.27	□□□□□ -1.89
CAF16	P43569	IOC3	YFR013W	2364 nt		3.26	□□□□□ -1.89
CAF16	P43569	RPS17B	YDR447C	411 nt		3.26	□□□□□ -1.89
CAF16	P43569	FYV4	YHR059W	393 nt		3.26	□□□□□ -1.89
CAF16	P43569	YMR316C-A	YMR316C-A	312 nt		3.26	□□□□□ -1.89
CAF16	P43569	BMS1	YPL217C	3552 nt		3.26	□□□□□ -1.89
CAF16	P43569	MED1	YPR070W	1701 nt		3.26	□□□□□ -1.89
CAF16	P43569	AI2	Q0055	2565 nt		3.25	□□□□□ -1.89
CAF16	P43569	SSY1	YDR160W	2559 nt		3.25	□□□□□ -1.89
CAF16	P43569	MSR1	YHR091C	1932 nt		3.25	□□□□□ -1.89
CAF16	P43569	ECM5	YMR176W	4236 nt		3.25	□□□□□ -1.89
CAF16	P43569	TIM8	YJR135W-A	264 nt		3.25	□□□□□ -1.89
CAF16	P43569	YAL063C-A	YAL063C-A	291 nt		3.25	□□□□□ -1.89
CAF16	P43569	YDL180W	YDL180W	1644 nt		3.25	□□□□□ -1.89
CAF16	P43569	ENA5	YDR038C	3276 nt		3.25	□□□□□ -1.89
CAF16	P43569	ENA2	YDR039C	3276 nt		3.25	□□□□□ -1.89
CAF16	P43569	ENA1	YDR040C	3276 nt		3.25	□□□□□ -1.89
CAF16	P43569	FLO9	YAL063C	3969 nt		3.25	□□□□□ -1.89
CAF16	P43569	SQS1	YNL224C	2304 nt		3.24	□□□□□ -1.89
CAF16	P43569	JIP3	YLR331C	378 nt		3.24	□□□□□ -1.89
CAF16	P43569	ESF2	YNR054C	951 nt		3.24	□□□□□ -1.89
CAF16	P43569	YOR199W	YOR199W	330 nt		3.24	□□□□□ -1.89
CAF16	P43569	DAN4	YJR151C	3486 nt		3.24	□□□□□ -1.89
CAF16	P43569	DNM1	YLL001W	2274 nt		3.24	□□□□□ -1.89
CAF16	P43569	GCD10	YNL062C	1437 nt		3.24	□□□□□ -1.89
CAF16	P43569	SNX41	YDR425W	1878 nt		3.24	□□□□□ -1.89
CAF16	P43569	SPB1	YCL054W	2526 nt		3.24	□□□□□ -1.89
CAF16	P43569	SMC3	YJL074C	3693 nt		3.23	□□□□□ -1.89
CAF16	P43569	YDR230W	YDR230W	348 nt		3.23	□□□□□ -1.89
CAF16	P43569	tT(UGU)Q1	tT(UGU)Q1	76 nt		3.23	□□□□□ -1.89
CAF16	P43569	YKL136W	YKL136W	399 nt		3.23	□□□□□ -1.89
CAF16	P43569	YML009C-A	YML009C-A	327 nt		3.23	□□□□□ -1.89
CAF16	P43569	UNG1	YML021C	1080 nt		3.23	□□□□□ -1.89
CAF16	P43569	SPC72	YAL047C	1869 nt		3.22	□□□□□ -1.89
CAF16	P43569	TRS120	YDR407C	3870 nt		3.22	□□□□□ -1.89
CAF16	P43569	YER076W-A	YER076W-A	348 nt		3.22	□□□□□ -1.89
CAF16	P43569	YIL058W	YIL058W	285 nt		3.22	□□□□□ -1.89
CAF16	P43569	RPS1A	YLR441C	768 nt		3.22	□□□□□ -1.89
CAF16	P43569	CGI121	YML036W	546 nt		3.22	□□□□□ -1.89
CAF16	P43569	YMR141C	YMR141C	309 nt		3.22	□□□□□ -1.89
CAF16	P43569	TIR2	YOR010C	756 nt		3.22	□□□□□ -1.89
CAF16	P43569	YBR225W	YBR225W	2703 nt		3.22	□□□□□ -1.89
CAF16	P43569	SMC2	YFR031C	3513 nt		3.22	□□□□□ -1.89
CAF16	P43569	RLF2	YPR018W	1821 nt		3.21	□□□□□ -1.89
CAF16	P43569	YDL068W	YDL068W	330 nt		3.21	□□□□□ -1.9
CAF16	P43569	GPI8	YDR331W	1236 nt		3.21	□□□□□ -1.9
CAF16	P43569	YOR146W	YOR146W	306 nt		3.21	□□□□□ -1.9
CAF16	P43569	APC2	YLR127C	2562 nt		3.21	□□□□□ -1.9
CAF16	P43569	YJR098C	YJR098C	1971 nt		3.21	□□□□□ -1.9
CAF16	P43569	YOL057W	YOL057W	2136 nt		3.2	□□□□□ -1.9
CAF16	P43569	NTO1	YPR031W	2247 nt		3.2	□□□□□ -1.9
CAF16	P43569	AYT1	YLL063C	1425 nt		3.2	□□□□□ -1.9
CAF16	P43569	POM152	YMR129W	4014 nt		3.2	□□□□□ -1.9
CAF16	P43569	TFC1	YBR123C	1950 nt		3.2	□□□□□ -1.9
CAF16	P43569	RPL27B	YDR471W	411 nt		3.2	□□□□□ -1.9
CAF16	P43569	USE1	YGL098W	738 nt		3.2	□□□□□ -1.9
CAF16	P43569	BAT1	YHR208W	1182 nt		3.2	□□□□□ -1.9
CAF16	P43569	YAL064W-B	YAL064W-B	381 nt		3.2	□□□□□ -1.9
CAF16	P43569	IMP4	YNL075W	873 nt		3.2	□□□□□ -1.9
CAF16	P43569	YPL038W-A	YPL038W-A	192 nt		3.2	□□□□□ -1.9
CAF16	P43569	COX18	YGR062C	951 nt		3.19	□□□□□ -1.9
CAF16	P43569	RPL8B	YLL045C	771 nt		3.19	□□□□□ -1.9
CAF16	P43569	AIM32	YML050W	936 nt		3.19	□□□□□ -1.9
CAF16	P43569	YML099W-A	YML099W-A	330 nt		3.19	□□□□□ -1.9
CAF16	P43569	YOR131C	YOR131C	657 nt		3.19	□□□□□ -1.9
CAF16	P43569	BNA4	YBL098W	1383 nt		3.19	□□□□□ -1.9
CAF16	P43569	TRM2	YKR056W	1920 nt		3.19	□□□□□ -1.9
CAF16	P43569	YIL166C	YIL166C	1629 nt		3.19	□□□□□ -1.9
CAF16	P43569	YEL025C	YEL025C	3567 nt		3.18	□□□□□ -1.9
CAF16	P43569	YAK1	YJL141C	2424 nt		3.18	□□□□□ -1.9
CAF16	P43569	FAP7	YDL166C	594 nt		3.18	□□□□□ -1.9
CAF16	P43569	YPR016W-A	YPR016W-A	261 nt		3.18	□□□□□ -1.9
CAF16	P43569	RPA135	YPR010C	3612 nt		3.18	□□□□□ -1.9
CAF16	P43569	KIN2	YLR096W	3444 nt		3.18	□□□□□ -1.9
CAF16	P43569	DUF1	YOL087C	3351 nt		3.18	□□□□□ -1.9
CAF16	P43569	GLC3	YEL011W	2115 nt		3.17	□□□□□ -1.9
CAF16	P43569	FRT2	YAL028W	1587 nt		3.17	□□□□□ -1.9
CAF16	P43569	TCB3	YML072C	4638 nt		3.17	□□□□□ -1.9
CAF16	P43569	YAT2	YER024W	2772 nt		3.17	□□□□□ -1.9
CAF16	P43569	ADK1	YDR226W	669 nt		3.17	□□□□□ -1.9

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