Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YHL002C-AYHL002C-A 489 nt2.05□□□□□ -2.08
VPS3P23643 ATG10YLL042C 504 nt2.05□□□□□ -2.08
VPS3P23643 RPL16BYNL069C 597 nt2.05□□□□□ -2.08
VPS3P23643 SLK19YOR195W 2466 nt2.05□□□□□ -2.08
VPS3P23643 YEA4YEL004W 1029 nt2.04□□□□□ -2.08
VPS3P23643 OST5YGL226C-A 261 nt2.04□□□□□ -2.08
VPS3P23643 RPL11BYGR085C 525 nt2.04□□□□□ -2.08
VPS3P23643 VPS8YAL002W 3825 nt2.04□□□□□ -2.08
VPS3P23643 UBR2YLR024C 5619 nt2.04□□□□□ -2.08
VPS3P23643 YBL012CYBL012C 402 nt2.04□□□□□ -2.08
VPS3P23643 YNR034W-AYNR034W-A 297 nt2.04□□□□□ -2.08
VPS3P23643 BFR1YOR198C 1413 nt2.04□□□□□ -2.08
VPS3P23643 RPL11AYPR102C 525 nt2.04□□□□□ -2.08
VPS3P23643 RRP15YPR143W 753 nt2.04□□□□□ -2.08
VPS3P23643 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
VPS3P23643 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
VPS3P23643 REV1YOR346W 2958 nt2.04□□□□□ -2.08
VPS3P23643 SRP1YNL189W 1629 nt2.03□□□□□ -2.08
VPS3P23643 YDR034C-CYDR034C-C 1317 nt2.03□□□□□ -2.08
VPS3P23643 YLR410W-AYLR410W-A 1317 nt2.03□□□□□ -2.08
VPS3P23643 YCR090CYCR090C 549 nt2.03□□□□□ -2.08
VPS3P23643 YCR108CYCR108C 192 nt2.03□□□□□ -2.08
VPS3P23643 ATC1YDR184C 885 nt2.03□□□□□ -2.08
VPS3P23643 PIB1YDR313C 861 nt2.03□□□□□ -2.08
VPS3P23643 YGR226CYGR226C 210 nt2.03□□□□□ -2.08
VPS3P23643 YHR022CYHR022C 771 nt2.03□□□□□ -2.08
VPS3P23643 YIL058WYIL058W 285 nt2.03□□□□□ -2.08
VPS3P23643 RFA3YJL173C 369 nt2.03□□□□□ -2.08
VPS3P23643 CMC1YKL137W 336 nt2.03□□□□□ -2.08
VPS3P23643 HYM1YKL189W 1200 nt2.03□□□□□ -2.08
VPS3P23643 YBR277CYBR277C 402 nt2.03□□□□□ -2.08
VPS3P23643 YPR089WYPR089W 2667 nt2.03□□□□□ -2.09
VPS3P23643 RTT101YJL047C 2529 nt2.02□□□□□ -2.09
VPS3P23643 RTT107YHR154W 3213 nt2.02□□□□□ -2.09
VPS3P23643 GAL80YML051W 1308 nt2.02□□□□□ -2.09
VPS3P23643 YDL118WYDL118W 381 nt2.02□□□□□ -2.09
VPS3P23643 YDR262WYDR262W 819 nt2.02□□□□□ -2.09
VPS3P23643 LCL2YLR104W 396 nt2.02□□□□□ -2.09
VPS3P23643 YIP3YNL044W 531 nt2.02□□□□□ -2.09
VPS3P23643 YPR145C-AYPR145C-A 237 nt2.02□□□□□ -2.09
VPS3P23643 NEO1YIL048W 3456 nt2.02□□□□□ -2.09
VPS3P23643 CST9YLR394W 1449 nt2.01□□□□□ -2.09
VPS3P23643 KAR1YNL188W 1302 nt2.01□□□□□ -2.09
VPS3P23643 SSP1YHR184W 1716 nt2.01□□□□□ -2.09
VPS3P23643 FYV4YHR059W 393 nt2.01□□□□□ -2.09
VPS3P23643 YPT52YKR014C 705 nt2.01□□□□□ -2.09
VPS3P23643 RPS30AYLR287C-A 192 nt2.01□□□□□ -2.09
VPS3P23643 YBL062WYBL062W 381 nt2.01□□□□□ -2.09
VPS3P23643 RRT16YNL105W 429 nt2.01□□□□□ -2.09
VPS3P23643 AGC1YPR021C 2709 nt2.01□□□□□ -2.09
VPS3P23643 NCS2YNL119W 1482 nt2.01□□□□□ -2.09
VPS3P23643 TRZ1YKR079C 2517 nt2□□□□□ -2.09
VPS3P23643 NGG1YDR176W 2109 nt2□□□□□ -2.09
VPS3P23643 BAS1YKR099W 2436 nt2□□□□□ -2.09
VPS3P23643 SSF2YDR312W 1362 nt2□□□□□ -2.09
VPS3P23643 YJL016WYJL016W 1686 nt2□□□□□ -2.09
VPS3P23643 YCR081C-AYCR081C-A 237 nt2□□□□□ -2.09
VPS3P23643 PCL5YHR071W 690 nt2□□□□□ -2.09
VPS3P23643 VAM3YOR106W 852 nt2□□□□□ -2.09
VPS3P23643 APA1YCL050C 966 nt2□□□□□ -2.09
VPS3P23643 MET18YIL128W 3099 nt2□□□□□ -2.09
VPS3P23643 MFB1YDR219C 1398 nt1.99□□□□□ -2.09
VPS3P23643 YIL166CYIL166C 1629 nt1.99□□□□□ -2.09
VPS3P23643 DFG16YOR030W 1860 nt1.99□□□□□ -2.09
VPS3P23643 GPX1YKL026C 504 nt1.99□□□□□ -2.09
VPS3P23643 RLP24YLR009W 600 nt1.99□□□□□ -2.09
VPS3P23643 NEJ1YLR265C 1029 nt1.99□□□□□ -2.09
VPS3P23643 PEP12YOR036W 867 nt1.99□□□□□ -2.09
VPS3P23643 VPH1YOR270C 2523 nt1.99□□□□□ -2.09
VPS3P23643 CFT2YLR115W 2580 nt1.99□□□□□ -2.09
VPS3P23643 DAL5YJR152W 1632 nt1.99□□□□□ -2.09
VPS3P23643 MGA2YIR033W 3342 nt1.98□□□□□ -2.09
VPS3P23643 PRK1YIL095W 2433 nt1.98□□□□□ -2.09
VPS3P23643 MRPL32YCR003W 552 nt1.98□□□□□ -2.09
VPS3P23643 RAV2YDR202C 1056 nt1.98□□□□□ -2.09
VPS3P23643 IRC4YDR540C 540 nt1.98□□□□□ -2.09
VPS3P23643 MIC19YFR011C 513 nt1.98□□□□□ -2.09
VPS3P23643 TMA7YLR262C-A 195 nt1.98□□□□□ -2.09
VPS3P23643 YLR379WYLR379W 375 nt1.98□□□□□ -2.09
VPS3P23643 YOR392WYOR392W 444 nt1.98□□□□□ -2.09
VPS3P23643 CUR1YPR158W 759 nt1.98□□□□□ -2.09
VPS3P23643 KIP1YBL063W 3336 nt1.98□□□□□ -2.09
VPS3P23643 SET2YJL168C 2202 nt1.98□□□□□ -2.09
VPS3P23643 YDR338CYDR338C 2088 nt1.97□□□□□ -2.09
VPS3P23643 RRP6YOR001W 2202 nt1.97□□□□□ -2.09
VPS3P23643 HTB1YDR224C 396 nt1.97□□□□□ -2.09
VPS3P23643 AIM23YJL131C 1071 nt1.97□□□□□ -2.09
VPS3P23643 SMD2YLR275W 333 nt1.97□□□□□ -2.09
VPS3P23643 MRPS8YMR158W 468 nt1.97□□□□□ -2.09
VPS3P23643 PSK2YOL045W 3306 nt1.97□□□□□ -2.09
VPS3P23643 RAD18YCR066W 1464 nt1.96□□□□□ -2.1
VPS3P23643 YCR013CYCR013C 648 nt1.96□□□□□ -2.1
VPS3P23643 TPK3YKL166C 1197 nt1.96□□□□□ -2.1
VPS3P23643 YMR272W-BYMR272W-B 108 nt1.96□□□□□ -2.1
VPS3P23643 YOL038C-AYOL038C-A 96 nt1.96□□□□□ -2.1
VPS3P23643 MED8YBR193C 672 nt1.96□□□□□ -2.1
VPS3P23643 DIS3YOL021C 3006 nt1.96□□□□□ -2.1
VPS3P23643 NPR1YNL183C 2373 nt1.96□□□□□ -2.1
VPS3P23643 ARP7YPR034W 1434 nt1.96□□□□□ -2.1
VPS3P23643 STD1YOR047C 1335 nt1.95□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms