Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB2O43679 CNN2P6-201ENST00000439038 900 ntBASIC20.59■□□□□ 0.89
LDB2O43679 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LDB2O43679 AC007322.4-201ENST00000509611 723 ntBASIC20.59■□□□□ 0.89
LDB2O43679 IKBKGP1-201ENST00000612193 1073 ntBASIC20.59■□□□□ 0.89
LDB2O43679 AC092437.1-201ENST00000624794 1048 ntBASIC20.59■□□□□ 0.89
LDB2O43679 AC013268.1-206ENST00000638368 961 ntBASIC20.59■□□□□ 0.89
LDB2O43679 AC112229.1-201ENST00000639295 961 ntBASIC20.59■□□□□ 0.89
LDB2O43679 AC073314.1-201ENST00000568729 2216 ntBASIC20.59■□□□□ 0.89
LDB2O43679 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB2O43679 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDB2O43679 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LDB2O43679 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LDB2O43679 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDB2O43679 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.58■□□□□ 0.89
LDB2O43679 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.58■□□□□ 0.89
LDB2O43679 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.58■□□□□ 0.89
LDB2O43679 AL121603.2-201ENST00000557373 2117 ntBASIC20.58■□□□□ 0.89
LDB2O43679 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.58■□□□□ 0.89
LDB2O43679 AL591742.1-201ENST00000604433 565 ntBASIC20.58■□□□□ 0.89
LDB2O43679 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
LDB2O43679 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB2O43679 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB2O43679 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB2O43679 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDB2O43679 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LDB2O43679 AP005212.1-201ENST00000581547 1997 ntBASIC20.57■□□□□ 0.88
LDB2O43679 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LDB2O43679 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.57■□□□□ 0.88
LDB2O43679 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LDB2O43679 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 BID-214ENST00000617586 542 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB2O43679 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LDB2O43679 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LDB2O43679 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDB2O43679 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.57■□□□□ 0.88
LDB2O43679 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.57■□□□□ 0.88
LDB2O43679 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDB2O43679 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB2O43679 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB2O43679 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB2O43679 LINC01006-201ENST00000333319 2292 ntBASIC20.56■□□□□ 0.88
LDB2O43679 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LDB2O43679 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 CDV3P1-201ENST00000471403 739 ntBASIC20.56■□□□□ 0.88
LDB2O43679 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.56■□□□□ 0.88
LDB2O43679 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDB2O43679 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.56■□□□□ 0.88
LDB2O43679 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LDB2O43679 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LDB2O43679 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.55■□□□□ 0.88
LDB2O43679 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 AL162412.1-201ENST00000567129 965 ntBASIC20.55■□□□□ 0.88
LDB2O43679 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 MIR2861-201ENST00000636310 90 ntBASIC20.55■□□□□ 0.88
LDB2O43679 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
LDB2O43679 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.55■□□□□ 0.88
LDB2O43679 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDB2O43679 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.54■□□□□ 0.88
LDB2O43679 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LDB2O43679 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB2O43679 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.54■□□□□ 0.88
LDB2O43679 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.54■□□□□ 0.88
LDB2O43679 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDB2O43679 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.54■□□□□ 0.88
LDB2O43679 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms