Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHAC2Q9Y5I4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHAC2Q9Y5I4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHAC2Q9Y5I4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHAC2Q9Y5I4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 ECEL1P3-201ENST00000427961 737 ntBASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 C2orf69P4-201ENST00000565394 541 ntBASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
PCDHAC2Q9Y5I4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHAC2Q9Y5I4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 MIR718-201ENST00000390190 70 ntBASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PCDHAC2Q9Y5I4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHAC2Q9Y5I4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 AC006557.6-201ENST00000623071 864 ntBASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.64■■□□□ 1.54
PCDHAC2Q9Y5I4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHAC2Q9Y5I4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHAC2Q9Y5I4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHAC2Q9Y5I4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.64■■□□□ 1.53
PCDHAC2Q9Y5I4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms