Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA13Q9Y5I0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 PBX2P1-201ENST00000493219 1291 ntBASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA13Q9Y5I0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA13Q9Y5I0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.02■■□□□ 1.11
PCDHA13Q9Y5I0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 AC096631.2-201ENST00000436136 790 ntBASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 AP001330.3-201ENST00000520123 633 ntBASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA13Q9Y5I0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA13Q9Y5I0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 AC106739.1-201ENST00000617035 715 ntBASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms