Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 IRC6YFR043C 714 nt1.59□□□□□ -2.15
TY1B-HO13535 MPO1YGL010W 525 nt1.59□□□□□ -2.15
TY1B-HO13535 SFT1YKL006C-A 294 nt1.59□□□□□ -2.15
TY1B-HO13535 UTP30YKR060W 825 nt1.59□□□□□ -2.15
TY1B-HO13535 YLR366WYLR366W 306 nt1.59□□□□□ -2.15
TY1B-HO13535 YMR321CYMR321C 318 nt1.59□□□□□ -2.15
TY1B-HO13535 YOR072W-AYOR072W-A 249 nt1.59□□□□□ -2.15
TY1B-HO13535 ATX2YOR079C 942 nt1.59□□□□□ -2.15
TY1B-HO13535 PTC5YOR090C 1719 nt1.59□□□□□ -2.16
TY1B-HO13535 CBF2YGR140W 2871 nt1.58□□□□□ -2.16
TY1B-HO13535 SPT7YBR081C 3999 nt1.58□□□□□ -2.16
TY1B-HO13535 TSC13YDL015C 933 nt1.58□□□□□ -2.16
TY1B-HO13535 SNX4YJL036W 1272 nt1.58□□□□□ -2.16
TY1B-HO13535 YML084WYML084W 309 nt1.58□□□□□ -2.16
TY1B-HO13535 YIL068W-AYIL068W-A 384 nt1.57□□□□□ -2.16
TY1B-HO13535 YAL034C-BYAL034C-B 354 nt1.57□□□□□ -2.16
TY1B-HO13535 TMA7YLR262C-A 195 nt1.57□□□□□ -2.16
TY1B-HO13535 YET1YKL065C 621 nt1.57□□□□□ -2.16
TY1B-HO13535 MED11YMR112C 396 nt1.57□□□□□ -2.16
TY1B-HO13535 YDL050CYDL050C 372 nt1.56□□□□□ -2.16
TY1B-HO13535 SDC1YDR469W 528 nt1.56□□□□□ -2.16
TY1B-HO13535 PMI40YER003C 1290 nt1.56□□□□□ -2.16
TY1B-HO13535 YKL069WYKL069W 543 nt1.56□□□□□ -2.16
TY1B-HO13535 YBR174CYBR174C 315 nt1.56□□□□□ -2.16
TY1B-HO13535 PBI1YPL272C 1554 nt1.56□□□□□ -2.16
TY1B-HO13535 SWI4YER111C 3282 nt1.55□□□□□ -2.16
TY1B-HO13535 SPT14YPL175W 1359 nt1.55□□□□□ -2.16
TY1B-HO13535 HTA1YDR225W 399 nt1.55□□□□□ -2.16
TY1B-HO13535 YGR273CYGR273C 525 nt1.55□□□□□ -2.16
TY1B-HO13535 YUH1YJR099W 711 nt1.55□□□□□ -2.16
TY1B-HO13535 CPR3YML078W 549 nt1.55□□□□□ -2.16
TY1B-HO13535 YDR336WYDR336W 945 nt1.54□□□□□ -2.16
TY1B-HO13535 RSM26YJR101W 801 nt1.54□□□□□ -2.16
TY1B-HO13535 HRT1YOL133W 366 nt1.54□□□□□ -2.16
TY1B-HO13535 YDR098C-AYDR098C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YDR210C-CYDR210C-C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YDR261C-CYDR261C-C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YDR316W-AYDR316W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YDR365W-AYDR365W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YER137C-AYER137C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YER159C-AYER159C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YGR027W-AYGR027W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YGR038C-AYGR038C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YGR161C-CYGR161C-C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YJR026WYJR026W 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YJR028WYJR028W 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YAR010CYAR010C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YLR157C-AYLR157C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YLR227W-AYLR227W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YLR256W-AYLR256W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YML040WYML040W 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YML045W-AYML045W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YMR051CYMR051C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YNL054W-AYNL054W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YOL103W-AYOL103W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YPL257W-AYPL257W-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YPR137C-AYPR137C-A 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 YPR158C-CYPR158C-C 1323 nt1.54□□□□□ -2.16
TY1B-HO13535 STE24YJR117W 1362 nt1.54□□□□□ -2.16
TY1B-HO13535 SEC4YFL005W 648 nt1.54□□□□□ -2.16
TY1B-HO13535 YKL177WYKL177W 339 nt1.54□□□□□ -2.16
TY1B-HO13535 YPT52YKR014C 705 nt1.54□□□□□ -2.16
TY1B-HO13535 MUM3YOR298W 1440 nt1.54□□□□□ -2.16
TY1B-HO13535 CDC39YCR093W 6327 nt1.53□□□□□ -2.16
TY1B-HO13535 GRE2YOL151W 1029 nt1.53□□□□□ -2.16
TY1B-HO13535 YMR160WYMR160W 2451 nt1.53□□□□□ -2.16
TY1B-HO13535 RAD18YCR066W 1464 nt1.53□□□□□ -2.16
TY1B-HO13535 YBR138CYBR138C 1575 nt1.52□□□□□ -2.17
TY1B-HO13535 PGD1YGL025C 1194 nt1.52□□□□□ -2.17
TY1B-HO13535 VMA5YKL080W 1179 nt1.52□□□□□ -2.17
TY1B-HO13535 YBL005W-BYBL005W-B 5268 nt1.52□□□□□ -2.17
TY1B-HO13535 GCN2YDR283C 4980 nt1.52□□□□□ -2.17
TY1B-HO13535 IQG1YPL242C 4488 nt1.52□□□□□ -2.17
TY1B-HO13535 RSA3YLR221C 663 nt1.52□□□□□ -2.17
TY1B-HO13535 RDN58-1RDN58-1 158 nt1.52□□□□□ -2.17
TY1B-HO13535 RDN58-2RDN58-2 158 nt1.52□□□□□ -2.17
TY1B-HO13535 MRPL44YMR225C 297 nt1.52□□□□□ -2.17
TY1B-HO13535 YMR242W-AYMR242W-A 90 nt1.52□□□□□ -2.17
TY1B-HO13535 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
TY1B-HO13535 IRC3YDR332W 2070 nt1.51□□□□□ -2.17
TY1B-HO13535 YGR149WYGR149W 1299 nt1.51□□□□□ -2.17
TY1B-HO13535 ARG3YJL088W 1017 nt1.51□□□□□ -2.17
TY1B-HO13535 YBL028CYBL028C 321 nt1.51□□□□□ -2.17
TY1B-HO13535 YBL077WYBL077W 432 nt1.51□□□□□ -2.17
TY1B-HO13535 MPD1YOR288C 957 nt1.51□□□□□ -2.17
TY1B-HO13535 PET127YOR017W 2403 nt1.51□□□□□ -2.17
TY1B-HO13535 PDS5YMR076C 3834 nt1.5□□□□□ -2.17
TY1B-HO13535 YNL144W-AYNL144W-A 84 nt1.5□□□□□ -2.17
TY1B-HO13535 HUL5YGL141W 2733 nt1.5□□□□□ -2.17
TY1B-HO13535 YDR355CYDR355C 303 nt1.49□□□□□ -2.17
TY1B-HO13535 RPS17BYDR447C 411 nt1.49□□□□□ -2.17
TY1B-HO13535 YNL276CYNL276C 396 nt1.49□□□□□ -2.17
TY1B-HO13535 CAF20YOR276W 486 nt1.49□□□□□ -2.17
TY1B-HO13535 SAR1YPL218W 573 nt1.49□□□□□ -2.17
TY1B-HO13535 NAM7YMR080C 2916 nt1.49□□□□□ -2.17
TY1B-HO13535 PAU3YCR104W 375 nt1.49□□□□□ -2.17
TY1B-HO13535 PCL9YDL179W 915 nt1.49□□□□□ -2.17
TY1B-HO13535 YAR075WYAR075W 474 nt1.49□□□□□ -2.17
TY1B-HO13535 TRM2YKR056W 1920 nt1.48□□□□□ -2.17
TY1B-HO13535 AEP3YPL005W 1821 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 51.2 ms