Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 AC010141.2-201ENST00000452426 721 ntBASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.94□□□□□ -0.02
TRGV1A0A0A0MS02 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 AP001160.3-201ENST00000601484 763 ntBASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRGV1A0A0A0MS02 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 AC121338.2-201ENST00000622535 1744 ntBASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 AC004854.2-201ENST00000608450 1441 ntBASIC14.92□□□□□ -0.02
TRGV1A0A0A0MS02 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 AC245052.3-201ENST00000450182 901 ntBASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 KRT16P2-201ENST00000414673 1423 ntBASIC14.91□□□□□ -0.02
TRGV1A0A0A0MS02 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms