Protein–RNA interactions for Protein: Q03702

CCE1, Cruciform cutting endonuclease 1, mitochondrial, yeastyeast

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCE1Q03702 tW(CCA)KtW(CCA)K 72 nt2.58□□□□□ -2
CCE1Q03702 YIL082WYIL082W 873 nt2.58□□□□□ -2
CCE1Q03702 tW(CCA)MtW(CCA)M 72 nt2.58□□□□□ -2
CCE1Q03702 tW(CCA)PtW(CCA)P 72 nt2.58□□□□□ -2
CCE1Q03702 YJR087WYJR087W 351 nt2.58□□□□□ -2
CCE1Q03702 MCR1YKL150W 909 nt2.58□□□□□ -2
CCE1Q03702 RPS16AYMR143W 432 nt2.58□□□□□ -2
CCE1Q03702 YNL043CYNL043C 321 nt2.58□□□□□ -2
CCE1Q03702 NGL1YOL042W 1092 nt2.58□□□□□ -2
CCE1Q03702 YBR062CYBR062C 543 nt2.58□□□□□ -2
CCE1Q03702 MED1YPR070W 1701 nt2.58□□□□□ -2
CCE1Q03702 UBX3YDL091C 1368 nt2.58□□□□□ -2
CCE1Q03702 MAL33YBR297W 1407 nt2.58□□□□□ -2
CCE1Q03702 ARK1YNL020C 1917 nt2.58□□□□□ -2
CCE1Q03702 YGR067CYGR067C 2415 nt2.58□□□□□ -2
CCE1Q03702 NET1YJL076W 3570 nt2.57□□□□□ -2
CCE1Q03702 INP52YNL106C 3552 nt2.57□□□□□ -2
CCE1Q03702 15S_rRNA15S_rRNA 1649 nt2.57□□□□□ -2
CCE1Q03702 DBP7YKR024C 2229 nt2.57□□□□□ -2
CCE1Q03702 RPL14BYHL001W 417 nt2.57□□□□□ -2
CCE1Q03702 YIR020C-BYIR020C-B 735 nt2.57□□□□□ -2
CCE1Q03702 YIR036W-AYIR036W-A 402 nt2.57□□□□□ -2
CCE1Q03702 SRP21YKL122C 504 nt2.57□□□□□ -2
CCE1Q03702 CDC123YLR215C 1083 nt2.57□□□□□ -2
CCE1Q03702 VMA6YLR447C 1038 nt2.57□□□□□ -2
CCE1Q03702 CSI1YMR025W 888 nt2.57□□□□□ -2
CCE1Q03702 CSM4YPL200W 471 nt2.57□□□□□ -2
CCE1Q03702 AXL1YPR122W 3627 nt2.57□□□□□ -2
CCE1Q03702 TMA64YDR117C 1698 nt2.57□□□□□ -2
CCE1Q03702 PCK1YKR097W 1650 nt2.57□□□□□ -2
CCE1Q03702 SEC7YDR170C 6030 nt2.56□□□□□ -2
CCE1Q03702 YER091C-AYER091C-A 222 nt2.56□□□□□ -2
CCE1Q03702 PNC1YGL037C 651 nt2.56□□□□□ -2
CCE1Q03702 VMA21YGR105W 234 nt2.56□□□□□ -2
CCE1Q03702 YHR213WYHR213W 597 nt2.56□□□□□ -2
CCE1Q03702 CKA1YIL035C 1119 nt2.56□□□□□ -2
CCE1Q03702 TDA8YAL064C-A 381 nt2.56□□□□□ -2
CCE1Q03702 YAR062WYAR062W 597 nt2.56□□□□□ -2
CCE1Q03702 YMR254CYMR254C 309 nt2.56□□□□□ -2
CCE1Q03702 MFB1YDR219C 1398 nt2.56□□□□□ -2
CCE1Q03702 VHR2YER064C 1518 nt2.56□□□□□ -2
CCE1Q03702 UTP15YMR093W 1542 nt2.56□□□□□ -2
CCE1Q03702 YKL100CYKL100C 1764 nt2.56□□□□□ -2
CCE1Q03702 TOR1YJR066W 7413 nt2.56□□□□□ -2
CCE1Q03702 TAF2YCR042C 4224 nt2.56□□□□□ -2
CCE1Q03702 YDR210W-BYDR210W-B 5313 nt2.55□□□□□ -2
CCE1Q03702 YDR261W-BYDR261W-B 5313 nt2.55□□□□□ -2
CCE1Q03702 YFL002W-AYFL002W-A 5313 nt2.55□□□□□ -2
CCE1Q03702 YGR161W-BYGR161W-B 5313 nt2.55□□□□□ -2
CCE1Q03702 YLR410W-BYLR410W-B 5313 nt2.55□□□□□ -2
CCE1Q03702 YCL019WYCL019W 5313 nt2.55□□□□□ -2
CCE1Q03702 YDR250CYDR250C 276 nt2.55□□□□□ -2
CCE1Q03702 TDA2YER071C 381 nt2.55□□□□□ -2
CCE1Q03702 SCY1YGL083W 2415 nt2.55□□□□□ -2
CCE1Q03702 BIT61YJL058C 1632 nt2.55□□□□□ -2
CCE1Q03702 YJL119CYJL119C 324 nt2.55□□□□□ -2
CCE1Q03702 DAD2YKR083C 402 nt2.55□□□□□ -2
CCE1Q03702 CWC24YLR323C 780 nt2.55□□□□□ -2
CCE1Q03702 YMR181CYMR181C 465 nt2.55□□□□□ -2
CCE1Q03702 YAP7YOL028C 738 nt2.55□□□□□ -2
CCE1Q03702 NUP170YBL079W 4509 nt2.54□□□□□ -2
CCE1Q03702 TFB1YDR311W 1929 nt2.54□□□□□ -2
CCE1Q03702 DBF20YPR111W 1695 nt2.54□□□□□ -2
CCE1Q03702 NCS2YNL119W 1482 nt2.54□□□□□ -2
CCE1Q03702 snR9snR9 187 nt2.54□□□□□ -2
CCE1Q03702 YGR053CYGR053C 852 nt2.54□□□□□ -2
CCE1Q03702 YIL012WYIL012W 342 nt2.54□□□□□ -2
CCE1Q03702 YJL086CYJL086C 369 nt2.54□□□□□ -2
CCE1Q03702 COX8YLR395C 237 nt2.54□□□□□ -2
CCE1Q03702 PIS1YPR113W 663 nt2.54□□□□□ -2
CCE1Q03702 Q0017Q0017 162 nt2.54□□□□□ -2
CCE1Q03702 NEW1YPL226W 3591 nt2.54□□□□□ -2
CCE1Q03702 SSP1YHR184W 1716 nt2.54□□□□□ -2
CCE1Q03702 PDR1YGL013C 3207 nt2.53□□□□□ -2
CCE1Q03702 RPN3YER021W 1572 nt2.53□□□□□ -2
CCE1Q03702 YCR090CYCR090C 549 nt2.53□□□□□ -2
CCE1Q03702 YDR115WYDR115W 318 nt2.53□□□□□ -2
CCE1Q03702 YKL023C-AYKL023C-A 228 nt2.53□□□□□ -2
CCE1Q03702 snR43snR43 209 nt2.53□□□□□ -2
CCE1Q03702 VPS41YDR080W 2979 nt2.53□□□□□ -2
CCE1Q03702 SWC4YGR002C 1431 nt2.52□□□□□ -2.01
CCE1Q03702 NEL1YHR035W 1893 nt2.52□□□□□ -2.01
CCE1Q03702 KIN82YCR091W 2163 nt2.52□□□□□ -2.01
CCE1Q03702 YDR018CYDR018C 1191 nt2.52□□□□□ -2.01
CCE1Q03702 EMC4YGL231C 573 nt2.52□□□□□ -2.01
CCE1Q03702 ACF4YJR083C 930 nt2.52□□□□□ -2.01
CCE1Q03702 EMC6YLL014W 327 nt2.52□□□□□ -2.01
CCE1Q03702 ATP18YML081C-A 180 nt2.52□□□□□ -2.01
CCE1Q03702 RRT16YNL105W 429 nt2.52□□□□□ -2.01
CCE1Q03702 SFM1YOR021C 642 nt2.52□□□□□ -2.01
CCE1Q03702 BOI1YBL085W 2943 nt2.52□□□□□ -2.01
CCE1Q03702 YCK2YNL154C 1641 nt2.52□□□□□ -2.01
CCE1Q03702 KAR9YPL269W 1935 nt2.52□□□□□ -2.01
CCE1Q03702 snR59snR59 78 nt2.51□□□□□ -2.01
CCE1Q03702 NCB2YDR397C 441 nt2.51□□□□□ -2.01
CCE1Q03702 BAT1YHR208W 1182 nt2.51□□□□□ -2.01
CCE1Q03702 CPR7YJR032W 1182 nt2.51□□□□□ -2.01
CCE1Q03702 GMC2YLR445W 567 nt2.51□□□□□ -2.01
CCE1Q03702 YNL150WYNL150W 408 nt2.51□□□□□ -2.01
CCE1Q03702 SKT5YBL061C 2091 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 24.2 ms