Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 tW(CCA)MtW(CCA)M 72 nt2.16□□□□□ -2.06
UFD1P53044 tW(CCA)PtW(CCA)P 72 nt2.16□□□□□ -2.06
UFD1P53044 YLR257WYLR257W 966 nt2.16□□□□□ -2.06
UFD1P53044 YPT6YLR262C 648 nt2.16□□□□□ -2.06
UFD1P53044 SAS2YMR127C 1017 nt2.16□□□□□ -2.06
UFD1P53044 RPL25YOL127W 429 nt2.16□□□□□ -2.06
UFD1P53044 HSP10YOR020C 321 nt2.16□□□□□ -2.06
UFD1P53044 SME1YOR159C 285 nt2.16□□□□□ -2.06
UFD1P53044 RPL11AYPR102C 525 nt2.16□□□□□ -2.06
UFD1P53044 RXT2YBR095C 1293 nt2.16□□□□□ -2.06
UFD1P53044 CBP6YBR120C 489 nt2.16□□□□□ -2.06
UFD1P53044 SEC66YBR171W 621 nt2.16□□□□□ -2.06
UFD1P53044 ASI3YNL008C 2031 nt2.16□□□□□ -2.06
UFD1P53044 PDR1YGL013C 3207 nt2.16□□□□□ -2.06
UFD1P53044 URK1YNR012W 1506 nt2.16□□□□□ -2.06
UFD1P53044 VPS38YLR360W 1320 nt2.16□□□□□ -2.06
UFD1P53044 SSN2YDR443C 4263 nt2.15□□□□□ -2.06
UFD1P53044 SVL3YPL032C 2478 nt2.15□□□□□ -2.06
UFD1P53044 YJL181WYJL181W 1836 nt2.15□□□□□ -2.06
UFD1P53044 THG1YGR024C 714 nt2.15□□□□□ -2.07
UFD1P53044 LIN1YHR156C 1023 nt2.15□□□□□ -2.07
UFD1P53044 COX3Q0275 810 nt2.15□□□□□ -2.07
UFD1P53044 BET3YKR068C 582 nt2.15□□□□□ -2.07
UFD1P53044 YOL107WYOL107W 1029 nt2.15□□□□□ -2.07
UFD1P53044 HEM4YOR278W 828 nt2.15□□□□□ -2.07
UFD1P53044 YBT1YLL048C 4986 nt2.15□□□□□ -2.07
UFD1P53044 LST4YKL176C 2487 nt2.14□□□□□ -2.07
UFD1P53044 snR83snR83 306 nt2.14□□□□□ -2.07
UFD1P53044 YDR203WYDR203W 318 nt2.14□□□□□ -2.07
UFD1P53044 YDR250CYDR250C 276 nt2.14□□□□□ -2.07
UFD1P53044 YHR032W-AYHR032W-A 180 nt2.14□□□□□ -2.07
UFD1P53044 PEX18YHR160C 852 nt2.14□□□□□ -2.07
UFD1P53044 YHR180W-AYHR180W-A 183 nt2.14□□□□□ -2.07
UFD1P53044 YHR213WYHR213W 597 nt2.14□□□□□ -2.07
UFD1P53044 YJR020WYJR020W 333 nt2.14□□□□□ -2.07
UFD1P53044 YAR062WYAR062W 597 nt2.14□□□□□ -2.07
UFD1P53044 RRD2YPL152W 1077 nt2.14□□□□□ -2.07
UFD1P53044 TPS2YDR074W 2691 nt2.14□□□□□ -2.07
UFD1P53044 DNL4YOR005C 2835 nt2.13□□□□□ -2.07
UFD1P53044 PCL5YHR071W 690 nt2.13□□□□□ -2.07
UFD1P53044 CAP1YKL007W 807 nt2.13□□□□□ -2.07
UFD1P53044 PAI3YMR174C 207 nt2.13□□□□□ -2.07
UFD1P53044 YNL050CYNL050C 813 nt2.13□□□□□ -2.07
UFD1P53044 YPR014CYPR014C 330 nt2.13□□□□□ -2.07
UFD1P53044 MBA1YBR185C 837 nt2.13□□□□□ -2.07
UFD1P53044 YBR209WYBR209W 318 nt2.13□□□□□ -2.07
UFD1P53044 VMA9YCL005W-A 222 nt2.13□□□□□ -2.07
UFD1P53044 AGE1YDR524C 1449 nt2.13□□□□□ -2.07
UFD1P53044 YDR338CYDR338C 2088 nt2.13□□□□□ -2.07
UFD1P53044 MAL33YBR297W 1407 nt2.12□□□□□ -2.07
UFD1P53044 RSM28YDR494W 1086 nt2.12□□□□□ -2.07
UFD1P53044 MIC19YFR011C 513 nt2.12□□□□□ -2.07
UFD1P53044 YIL012WYIL012W 342 nt2.12□□□□□ -2.07
UFD1P53044 YJL133C-AYJL133C-A 225 nt2.12□□□□□ -2.07
UFD1P53044 GIM5YML094W 492 nt2.12□□□□□ -2.07
UFD1P53044 RPL16BYNL069C 597 nt2.12□□□□□ -2.07
UFD1P53044 BRX1YOL077C 876 nt2.12□□□□□ -2.07
UFD1P53044 YOR050CYOR050C 348 nt2.12□□□□□ -2.07
UFD1P53044 SUS1YBR111W-A 291 nt2.12□□□□□ -2.07
UFD1P53044 VHR1YIL056W 1923 nt2.12□□□□□ -2.07
UFD1P53044 PDS5YMR076C 3834 nt2.11□□□□□ -2.07
UFD1P53044 VPS13YLL040C 9435 nt2.11□□□□□ -2.07
UFD1P53044 APC11YDL008W 498 nt2.11□□□□□ -2.07
UFD1P53044 YRB1YDR002W 606 nt2.11□□□□□ -2.07
UFD1P53044 YDR248CYDR248C 582 nt2.11□□□□□ -2.07
UFD1P53044 YER091C-AYER091C-A 222 nt2.11□□□□□ -2.07
UFD1P53044 ECI1YLR284C 843 nt2.11□□□□□ -2.07
UFD1P53044 CWC24YLR323C 780 nt2.11□□□□□ -2.07
UFD1P53044 RPS1AYLR441C 768 nt2.11□□□□□ -2.07
UFD1P53044 YPL119C-AYPL119C-A 264 nt2.11□□□□□ -2.07
UFD1P53044 YBR062CYBR062C 543 nt2.11□□□□□ -2.07
UFD1P53044 ATP20YPR020W 348 nt2.11□□□□□ -2.07
UFD1P53044 POP7YBR167C 423 nt2.11□□□□□ -2.07
UFD1P53044 YOL098CYOL098C 3114 nt2.11□□□□□ -2.07
UFD1P53044 STI1YOR027W 1770 nt2.1□□□□□ -2.07
UFD1P53044 FIR1YER032W 2631 nt2.1□□□□□ -2.07
UFD1P53044 YEL1YBL060W 2064 nt2.1□□□□□ -2.07
UFD1P53044 SNX41YDR425W 1878 nt2.1□□□□□ -2.07
UFD1P53044 PCK1YKR097W 1650 nt2.1□□□□□ -2.07
UFD1P53044 YCR090CYCR090C 549 nt2.1□□□□□ -2.07
UFD1P53044 YFH1YDL120W 525 nt2.1□□□□□ -2.07
UFD1P53044 TIM11YDR322C-A 291 nt2.1□□□□□ -2.07
UFD1P53044 NTF2YER009W 378 nt2.1□□□□□ -2.07
UFD1P53044 PGD1YGL025C 1194 nt2.1□□□□□ -2.07
UFD1P53044 YGL109WYGL109W 324 nt2.1□□□□□ -2.07
UFD1P53044 COG2YGR120C 789 nt2.1□□□□□ -2.07
UFD1P53044 PEX4YGR133W 552 nt2.1□□□□□ -2.07
UFD1P53044 YPT52YKR014C 705 nt2.1□□□□□ -2.07
UFD1P53044 EMC6YLL014W 327 nt2.1□□□□□ -2.07
UFD1P53044 URA5YML106W 681 nt2.1□□□□□ -2.07
UFD1P53044 RPS16AYMR143W 432 nt2.1□□□□□ -2.07
UFD1P53044 RRT16YNL105W 429 nt2.1□□□□□ -2.07
UFD1P53044 YOL057WYOL057W 2136 nt2.1□□□□□ -2.07
UFD1P53044 YBR063CYBR063C 1215 nt2.1□□□□□ -2.07
UFD1P53044 snR43snR43 209 nt2.1□□□□□ -2.07
UFD1P53044 BNI1YNL271C 5862 nt2.1□□□□□ -2.07
UFD1P53044 ALY1YKR021W 2748 nt2.1□□□□□ -2.07
UFD1P53044 SEN54YPL083C 1404 nt2.09□□□□□ -2.07
UFD1P53044 NUP170YBL079W 4509 nt2.09□□□□□ -2.07
UFD1P53044 YCR013CYCR013C 648 nt2.09□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms