Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 TAR1YLR154W-C 375 nt3.89□□□□□ -1.79
PUB1P32588 ILV5YLR355C 1188 nt3.89□□□□□ -1.79 RIP-Chip
PUB1P32588 PRE8YML092C 753 nt3.89□□□□□ -1.79
PUB1P32588 OPY2YPR075C 1083 nt3.89□□□□□ -1.79
PUB1P32588 snR35snR35 204 nt3.89□□□□□ -1.79
PUB1P32588 RIM13YMR154C 2184 nt3.89□□□□□ -1.79 RIP-Chip
PUB1P32588 SAP155YFR040W 3009 nt3.89□□□□□ -1.79
PUB1P32588 RKM1YPL208W 1752 nt3.89□□□□□ -1.79
PUB1P32588 MEF2YJL102W 2460 nt3.88□□□□□ -1.79
PUB1P32588 FZO1YBR179C 2568 nt3.88□□□□□ -1.79
PUB1P32588 VIK1YPL253C 1944 nt3.88□□□□□ -1.79
PUB1P32588 GAL4YPL248C 2646 nt3.88□□□□□ -1.79
PUB1P32588 ATP17YDR377W 306 nt3.88□□□□□ -1.79
PUB1P32588 RRT13YER066W 558 nt3.88□□□□□ -1.79
PUB1P32588 MVB12YGR206W 306 nt3.88□□□□□ -1.79 RIP-Chip
PUB1P32588 tQ(UUG)CtQ(UUG)C 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)D1tQ(UUG)D1 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)D2tQ(UUG)D2 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)D3tQ(UUG)D3 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)E1tQ(UUG)E1 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)HtQ(UUG)H 72 nt3.88□□□□□ -1.79
PUB1P32588 tQ(UUG)LtQ(UUG)L 72 nt3.88□□□□□ -1.79
PUB1P32588 YIR040CYIR040C 333 nt3.88□□□□□ -1.79
PUB1P32588 TVP18YMR071C 504 nt3.88□□□□□ -1.79
PUB1P32588 SHQ1YIL104C 1524 nt3.88□□□□□ -1.79
PUB1P32588 KRS1YDR037W 1776 nt3.88□□□□□ -1.79
PUB1P32588 YPK9YOR291W 4419 nt3.88□□□□□ -1.79
PUB1P32588 SKG6YHR149C 2205 nt3.87□□□□□ -1.79
PUB1P32588 BYE1YKL005C 1785 nt3.87□□□□□ -1.79
PUB1P32588 BUD6YLR319C 2367 nt3.87□□□□□ -1.79
PUB1P32588 LPP1YDR503C 825 nt3.87□□□□□ -1.79
PUB1P32588 COX18YGR062C 951 nt3.87□□□□□ -1.79
PUB1P32588 PAU14YIL176C 363 nt3.87□□□□□ -1.79
PUB1P32588 PAU1YJL223C 363 nt3.87□□□□□ -1.79
PUB1P32588 YNL057WYNL057W 333 nt3.87□□□□□ -1.79
PUB1P32588 YBR197CYBR197C 654 nt3.87□□□□□ -1.79
PUB1P32588 SEN1YLR430W 6696 nt3.87□□□□□ -1.79
PUB1P32588 PSP1YDR505C 2526 nt3.87□□□□□ -1.79 RIP-Chip
PUB1P32588 ICR1ICR1 3199 nt3.87□□□□□ -1.79
PUB1P32588 THI7YLR237W 1797 nt3.86□□□□□ -1.79 RIP-Chip
PUB1P32588 SPP382YLR424W 2127 nt3.86□□□□□ -1.79
PUB1P32588 MNN4YKL201C 3537 nt3.86□□□□□ -1.79
PUB1P32588 PMT4YJR143C 2289 nt3.86□□□□□ -1.79 RIP-Chip
PUB1P32588 snR55snR55 98 nt3.86□□□□□ -1.79
PUB1P32588 YGL052WYGL052W 306 nt3.86□□□□□ -1.79
PUB1P32588 YLR428CYLR428C 345 nt3.86□□□□□ -1.79
PUB1P32588 YGR266WYGR266W 2106 nt3.86□□□□□ -1.79
PUB1P32588 TEL1YBL088C 8364 nt3.85□□□□□ -1.79 RIP-Chip
PUB1P32588 ALD3YMR169C 1521 nt3.85□□□□□ -1.79
PUB1P32588 JHD2YJR119C 2187 nt3.85□□□□□ -1.79
PUB1P32588 RPL35AYDL191W 363 nt3.85□□□□□ -1.79
PUB1P32588 YER066C-AYER066C-A 501 nt3.85□□□□□ -1.79
PUB1P32588 RPS8BYER102W 603 nt3.85□□□□□ -1.79 RIP-Chip
PUB1P32588 YGR242WYGR242W 309 nt3.85□□□□□ -1.79
PUB1P32588 YAE1YJR067C 426 nt3.85□□□□□ -1.79
PUB1P32588 RPL6BYLR448W 531 nt3.85□□□□□ -1.79 RIP-Chip
PUB1P32588 YMR230W-AYMR230W-A 189 nt3.85□□□□□ -1.79
PUB1P32588 YOR008C-AYOR008C-A 225 nt3.85□□□□□ -1.79
PUB1P32588 RIA1YNL163C 3333 nt3.85□□□□□ -1.79
PUB1P32588 EAP1YKL204W 1899 nt3.85□□□□□ -1.79
PUB1P32588 HUL5YGL141W 2733 nt3.85□□□□□ -1.79
PUB1P32588 SNF2YOR290C 5112 nt3.84□□□□□ -1.79
PUB1P32588 HTL1YCR020W-B 237 nt3.84□□□□□ -1.79
PUB1P32588 CDC9YDL164C 2268 nt3.84□□□□□ -1.79
PUB1P32588 PCF11YDR228C 1881 nt3.84□□□□□ -1.8
PUB1P32588 MIS1YBR084W 2928 nt3.83□□□□□ -1.8
PUB1P32588 YLR140WYLR140W 327 nt3.83□□□□□ -1.8
PUB1P32588 NKP2YLR315W 462 nt3.83□□□□□ -1.8
PUB1P32588 SUI1YNL244C 327 nt3.83□□□□□ -1.8 RIP-Chip
PUB1P32588 YOR050CYOR050C 348 nt3.83□□□□□ -1.8
PUB1P32588 YOL153CYOL153C 1746 nt3.83□□□□□ -1.8
PUB1P32588 KCC4YCL024W 3114 nt3.83□□□□□ -1.8
PUB1P32588 NHX1YDR456W 1902 nt3.82□□□□□ -1.8 RIP-Chip
PUB1P32588 MDM30YLR368W 1797 nt3.82□□□□□ -1.8
PUB1P32588 SSH1YBR283C 1473 nt3.82□□□□□ -1.8 RIP-Chip
PUB1P32588 YOR034C-AYOR034C-A 243 nt3.82□□□□□ -1.8 RIP-Chip
PUB1P32588 ABF1YKL112W 2196 nt3.82□□□□□ -1.8
PUB1P32588 EXO70YJL085W 1872 nt3.81□□□□□ -1.8 RIP-Chip
PUB1P32588 FRQ1YDR373W 573 nt3.81□□□□□ -1.8
PUB1P32588 YDR442WYDR442W 393 nt3.81□□□□□ -1.8
PUB1P32588 YEL014CYEL014C 306 nt3.81□□□□□ -1.8
PUB1P32588 GPG1YGL121C 381 nt3.81□□□□□ -1.8
PUB1P32588 RPA12YJR063W 378 nt3.81□□□□□ -1.8 RIP-Chip
PUB1P32588 MRP8YKL142W 660 nt3.81□□□□□ -1.8
PUB1P32588 YBR201C-AYBR201C-A 204 nt3.81□□□□□ -1.8
PUB1P32588 PHO87YCR037C 2772 nt3.81□□□□□ -1.8 RIP-Chip
PUB1P32588 MET12YPL023C 1974 nt3.81□□□□□ -1.8
PUB1P32588 BRE4YDL231C 3378 nt3.81□□□□□ -1.8 RIP-Chip
PUB1P32588 YSW1YBR148W 1830 nt3.81□□□□□ -1.8
PUB1P32588 SNX41YDR425W 1878 nt3.8□□□□□ -1.8
PUB1P32588 URM1YIL008W 300 nt3.8□□□□□ -1.8
PUB1P32588 IRC18YJL037W 675 nt3.8□□□□□ -1.8
PUB1P32588 RPS21BYJL136C 264 nt3.8□□□□□ -1.8 RIP-Chip
PUB1P32588 RPS4AYJR145C 786 nt3.8□□□□□ -1.8 RIP-Chip
PUB1P32588 RDN5-1RDN5-1 121 nt3.8□□□□□ -1.8
PUB1P32588 RDN5-6RDN5-6 121 nt3.8□□□□□ -1.8
PUB1P32588 SLM6YBR266C 453 nt3.8□□□□□ -1.8
PUB1P32588 MGR1YCL044C 1254 nt3.8□□□□□ -1.8
PUB1P32588 BCH2YKR027W 2298 nt3.8□□□□□ -1.8
PUB1P32588 YJR030CYJR030C 2238 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 80.9 ms