Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 RBM17P2-201ENST00000616397 1405 ntBASIC20.18■□□□□ 0.82
SNAP47Q5SQN1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 OR10C1-204ENST00000622521 1039 ntBASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.17■□□□□ 0.82
SNAP47Q5SQN1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 MIPEPP3-201ENST00000412105 444 ntBASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 MIR4758-201ENST00000577688 71 ntBASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.16■□□□□ 0.82
SNAP47Q5SQN1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 AL591742.1-201ENST00000604433 565 ntBASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAP47Q5SQN1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SNAP47Q5SQN1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 C11orf96-202ENST00000528572 1834 ntBASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 BX276092.2-201ENST00000417668 665 ntBASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.14■□□□□ 0.81
SNAP47Q5SQN1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNAP47Q5SQN1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 MIR4651-201ENST00000582622 73 ntBASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAP47Q5SQN1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms