Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FCF1Q9Y324 AC245052.3-201ENST00000450182 901 ntBASIC21.2■□□□□ 0.98
FCF1Q9Y324 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FCF1Q9Y324 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FCF1Q9Y324 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FCF1Q9Y324 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FCF1Q9Y324 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
FCF1Q9Y324 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.19■□□□□ 0.98
FCF1Q9Y324 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.19■□□□□ 0.98
FCF1Q9Y324 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.19■□□□□ 0.98
FCF1Q9Y324 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.19■□□□□ 0.98
FCF1Q9Y324 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.19■□□□□ 0.98
FCF1Q9Y324 AC243732.1-201ENST00000612648 864 ntBASIC21.19■□□□□ 0.98
FCF1Q9Y324 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.19■□□□□ 0.98
FCF1Q9Y324 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.19■□□□□ 0.98
FCF1Q9Y324 AC068338.2-201ENST00000563278 1430 ntBASIC21.19■□□□□ 0.98
FCF1Q9Y324 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.19■□□□□ 0.98
FCF1Q9Y324 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FCF1Q9Y324 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FCF1Q9Y324 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FCF1Q9Y324 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FCF1Q9Y324 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 AC007322.4-201ENST00000509611 723 ntBASIC21.18■□□□□ 0.98
FCF1Q9Y324 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.18■□□□□ 0.98
FCF1Q9Y324 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
FCF1Q9Y324 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FCF1Q9Y324 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FCF1Q9Y324 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FCF1Q9Y324 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FCF1Q9Y324 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FCF1Q9Y324 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.17■□□□□ 0.98
FCF1Q9Y324 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
FCF1Q9Y324 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
FCF1Q9Y324 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FCF1Q9Y324 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FCF1Q9Y324 ID1-201ENST00000376105 1233 ntBASIC21.16■□□□□ 0.98
FCF1Q9Y324 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FCF1Q9Y324 HLA-L-209ENST00000420110 1011 ntBASIC21.16■□□□□ 0.98
FCF1Q9Y324 CYP2T1P-201ENST00000432607 1285 ntBASIC21.16■□□□□ 0.98
FCF1Q9Y324 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FCF1Q9Y324 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FCF1Q9Y324 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FCF1Q9Y324 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FCF1Q9Y324 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
FCF1Q9Y324 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FCF1Q9Y324 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.14■□□□□ 0.98
FCF1Q9Y324 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
FCF1Q9Y324 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
FCF1Q9Y324 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FCF1Q9Y324 AC091799.1-201ENST00000422823 811 ntBASIC21.14■□□□□ 0.97
FCF1Q9Y324 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.14■□□□□ 0.97
FCF1Q9Y324 NCF1B-203ENST00000435988 1254 ntBASIC21.14■□□□□ 0.97
FCF1Q9Y324 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.14■□□□□ 0.97
FCF1Q9Y324 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms