Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 PCDHB18P-201ENST00000524813 2368 ntBASIC14.6□□□□□ -0.07
VPS25Q9BRG1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS25Q9BRG1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS25Q9BRG1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.07
VPS25Q9BRG1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 AC068418.2-201ENST00000577309 3703 ntBASIC14.58□□□□□ -0.08
VPS25Q9BRG1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VPS25Q9BRG1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 AL513477.1-201ENST00000602865 2407 ntBASIC14.57□□□□□ -0.08
VPS25Q9BRG1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 AC099398.1-201ENST00000567919 2776 ntBASIC14.57□□□□□ -0.08
VPS25Q9BRG1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VPS25Q9BRG1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS25Q9BRG1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS25Q9BRG1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS25Q9BRG1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS25Q9BRG1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS25Q9BRG1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms