RNA–Protein interactions for RNA: ENST00000372383.8

TSC22D3-203, Transcript of TSC22 domain family member 3, humanhuman

TSL 2 BASIC

Gene TSC22D3, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-203ENST00000372383 NISCHQ9Y2I1 1504 aa38.03■■■■□ 3.68
TSC22D3-203ENST00000372383 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
TSC22D3-203ENST00000372383 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
TSC22D3-203ENST00000372383 ABCC9O60706 1549 aa31.86■■■□□ 2.69
TSC22D3-203ENST00000372383 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
TSC22D3-203ENST00000372383 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
TSC22D3-203ENST00000372383 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.58
TSC22D3-203ENST00000372383 NACADO15069 1562 aa31.13■■■□□ 2.57
TSC22D3-203ENST00000372383 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.55
TSC22D3-203ENST00000372383 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
TSC22D3-203ENST00000372383 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
TSC22D3-203ENST00000372383 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
TSC22D3-203ENST00000372383 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
TSC22D3-203ENST00000372383 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
TSC22D3-203ENST00000372383 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
TSC22D3-203ENST00000372383 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.3
TSC22D3-203ENST00000372383 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
TSC22D3-203ENST00000372383 MROH2BQ7Z745 1585 aa29.38■■■□□ 2.29
TSC22D3-203ENST00000372383 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
TSC22D3-203ENST00000372383 SMARCA4P51532 1647 aa29.32■■■□□ 2.28
TSC22D3-203ENST00000372383 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
TSC22D3-203ENST00000372383 WIZO95785 1651 aa29.12■■■□□ 2.25
TSC22D3-203ENST00000372383 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
TSC22D3-203ENST00000372383 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
TSC22D3-203ENST00000372383 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
TSC22D3-203ENST00000372383 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
TSC22D3-203ENST00000372383 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
TSC22D3-203ENST00000372383 BAZ1BQ9UIG0 1483 aaKnown RBP28.74■■■□□ 2.19
TSC22D3-203ENST00000372383 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
TSC22D3-203ENST00000372383 PELP1Q8IZL8 1130 aaKnown RBP28.66■■■□□ 2.18
TSC22D3-203ENST00000372383 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
TSC22D3-203ENST00000372383 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
TSC22D3-203ENST00000372383 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
TSC22D3-203ENST00000372383 HRCP23327 699 aa28.29■■■□□ 2.12
TSC22D3-203ENST00000372383 CFTRP13569 1480 aa28■■■□□ 2.07
TSC22D3-203ENST00000372383 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
TSC22D3-203ENST00000372383 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
TSC22D3-203ENST00000372383 MYT1Q01538 1121 aa27.93■■■□□ 2.06
TSC22D3-203ENST00000372383 NESP48681 1621 aa27.86■■■□□ 2.05
TSC22D3-203ENST00000372383 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
TSC22D3-203ENST00000372383 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
TSC22D3-203ENST00000372383 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
TSC22D3-203ENST00000372383 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
TSC22D3-203ENST00000372383 FANCD2Q9BXW9 1451 aa27.67■■■□□ 2.02
TSC22D3-203ENST00000372383 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
TSC22D3-203ENST00000372383 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
TSC22D3-203ENST00000372383 SYNJ1O43426 1573 aa27.55■■■□□ 2
TSC22D3-203ENST00000372383 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
TSC22D3-203ENST00000372383 KIF21AQ7Z4S6 1674 aa27.53■■■□□ 2
TSC22D3-203ENST00000372383 CUX1P39880 1505 aa27.49■■□□□ 1.99
TSC22D3-203ENST00000372383 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
TSC22D3-203ENST00000372383 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.98
TSC22D3-203ENST00000372383 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
TSC22D3-203ENST00000372383 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
TSC22D3-203ENST00000372383 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
TSC22D3-203ENST00000372383 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
TSC22D3-203ENST00000372383 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
TSC22D3-203ENST00000372383 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
TSC22D3-203ENST00000372383 PPARGC1BQ86YN6 1023 aaKnown RBP27.23■■□□□ 1.95
TSC22D3-203ENST00000372383 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.94
TSC22D3-203ENST00000372383 SOGA1O94964 1423 aa27.19■■□□□ 1.94
TSC22D3-203ENST00000372383 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
TSC22D3-203ENST00000372383 POLA1P09884 1462 aaPredicted RBP27.17■■□□□ 1.94
TSC22D3-203ENST00000372383 THOC2Q8NI27 1593 aaKnown RBP27.15■■□□□ 1.94
TSC22D3-203ENST00000372383 WDR62O43379 1518 aa27.15■■□□□ 1.94
TSC22D3-203ENST00000372383 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
TSC22D3-203ENST00000372383 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.93
TSC22D3-203ENST00000372383 EEA1Q15075 1411 aa27.04■■□□□ 1.92
TSC22D3-203ENST00000372383 CUX2O14529 1486 aa27■■□□□ 1.91
TSC22D3-203ENST00000372383 ABCA10Q8WWZ4 1543 aa26.99■■□□□ 1.91
TSC22D3-203ENST00000372383 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
TSC22D3-203ENST00000372383 CSRNP3Q8WYN3 585 aa26.96■■□□□ 1.91
TSC22D3-203ENST00000372383 TARBP1Q13395 1621 aaKnown RBP26.95■■□□□ 1.9
TSC22D3-203ENST00000372383 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
TSC22D3-203ENST00000372383 SCAF1Q9H7N4 1312 aaKnown RBP26.91■■□□□ 1.9
TSC22D3-203ENST00000372383 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
TSC22D3-203ENST00000372383 IFT140Q96RY7 1462 aa26.89■■□□□ 1.89
TSC22D3-203ENST00000372383 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
TSC22D3-203ENST00000372383 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
TSC22D3-203ENST00000372383 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
TSC22D3-203ENST00000372383 IGF1RP08069 1367 aa26.78■■□□□ 1.88
TSC22D3-203ENST00000372383 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
TSC22D3-203ENST00000372383 ZNF608Q9ULD9 1512 aaPredicted RBP26.76■■□□□ 1.88
TSC22D3-203ENST00000372383 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.87
TSC22D3-203ENST00000372383 KIF21BO75037 1637 aa26.72■■□□□ 1.87
TSC22D3-203ENST00000372383 PRXQ9BXM0 1461 aa26.71■■□□□ 1.87
TSC22D3-203ENST00000372383 ZEB1P37275 1124 aaPredicted RBP26.7■■□□□ 1.87
TSC22D3-203ENST00000372383 GOLGA3Q08378 1498 aa26.67■■□□□ 1.86
TSC22D3-203ENST00000372383 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
TSC22D3-203ENST00000372383 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
TSC22D3-203ENST00000372383 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
TSC22D3-203ENST00000372383 PBRM1Q86U86 1689 aa26.65■■□□□ 1.86
TSC22D3-203ENST00000372383 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
TSC22D3-203ENST00000372383 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
TSC22D3-203ENST00000372383 CUL7Q14999 1698 aa26.61■■□□□ 1.85
TSC22D3-203ENST00000372383 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
TSC22D3-203ENST00000372383 TNIKQ9UKE5 1360 aa26.51■■□□□ 1.84
TSC22D3-203ENST00000372383 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
TSC22D3-203ENST00000372383 ADAMTS12P58397 1594 aa26.48■■□□□ 1.83
TSC22D3-203ENST00000372383 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms