Protein–RNA interactions for Protein: Q12472

TY2B-DR1, Transposon Ty2-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-DR1Q12472 SMP3YOR149C 1551 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 NPL4YBR170C 1743 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 HOP1YIL072W 1818 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 EAF7YNL136W 1278 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 CRS5YOR031W 210 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 CYC2YOR037W 1101 nt1.95□□□□□ -2.1
TY2B-DR1Q12472 YRR1YOR162C 2433 nt1.94□□□□□ -2.1
TY2B-DR1Q12472 EST3YIL009C-A 546 nt1.94□□□□□ -2.1
TY2B-DR1Q12472 YCK2YNL154C 1641 nt1.94□□□□□ -2.1
TY2B-DR1Q12472 UTP13YLR222C 2454 nt1.94□□□□□ -2.1
TY2B-DR1Q12472 YLR345WYLR345W 1530 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 GRX1YCL035C 333 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 PLP1YDR183W 693 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 MRPL9YGR220C 810 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 RMP1YLR145W 606 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 MPD2YOL088C 834 nt1.93□□□□□ -2.1
TY2B-DR1Q12472 UTP20YBL004W 7482 nt1.92□□□□□ -2.1
TY2B-DR1Q12472 DBP5YOR046C 1449 nt1.92□□□□□ -2.1
TY2B-DR1Q12472 YJR061WYJR061W 2808 nt1.92□□□□□ -2.1
TY2B-DR1Q12472 VPH2YKL119C 648 nt1.92□□□□□ -2.1
TY2B-DR1Q12472 ESF2YNR054C 951 nt1.92□□□□□ -2.1
TY2B-DR1Q12472 RDS2YPL133C 1341 nt1.91□□□□□ -2.1
TY2B-DR1Q12472 YCK3YER123W 1575 nt1.91□□□□□ -2.1
TY2B-DR1Q12472 RPL20AYMR242C 519 nt1.91□□□□□ -2.1
TY2B-DR1Q12472 UBC6YER100W 753 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 DCG1YIR030C 735 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 YOR292CYOR292C 930 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 TAF14YPL129W 735 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 MRPL27YBR282W 441 nt1.9□□□□□ -2.1
TY2B-DR1Q12472 SIP4YJL089W 2490 nt1.9□□□□□ -2.11
TY2B-DR1Q12472 YCR050CYCR050C 309 nt1.9□□□□□ -2.11
TY2B-DR1Q12472 MCM21YDR318W 1107 nt1.89□□□□□ -2.11
TY2B-DR1Q12472 YHI9YHR029C 885 nt1.89□□□□□ -2.11
TY2B-DR1Q12472 IRC21YMR073C 606 nt1.89□□□□□ -2.11
TY2B-DR1Q12472 MIG1YGL035C 1515 nt1.89□□□□□ -2.11
TY2B-DR1Q12472 IST1YNL265C 897 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 UBR1YGR184C 5853 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 FYV8YGR196C 2454 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 YJR003CYJR003C 1560 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 CDC53YDL132W 2448 nt1.88□□□□□ -2.11
TY2B-DR1Q12472 YCR087C-AYCR087C-A 462 nt1.87□□□□□ -2.11
TY2B-DR1Q12472 AEP2YMR282C 1743 nt1.87□□□□□ -2.11
TY2B-DR1Q12472 YLR035C-AYLR035C-A 3468 nt1.87□□□□□ -2.11
TY2B-DR1Q12472 YOR029WYOR029W 336 nt1.87□□□□□ -2.11
TY2B-DR1Q12472 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
TY2B-DR1Q12472 COS6YGR295C 1146 nt1.86□□□□□ -2.11
TY2B-DR1Q12472 SHE2YKL130C 741 nt1.86□□□□□ -2.11
TY2B-DR1Q12472 CTP1YBR291C 900 nt1.86□□□□□ -2.11
TY2B-DR1Q12472 RLI1YDR091C 1827 nt1.86□□□□□ -2.11
TY2B-DR1Q12472 MRE11YMR224C 2079 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 RPN9YDR427W 1182 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 DDI2YFL061W 678 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 RPL33BYOR234C 324 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 CTM1YHR109W 1758 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 OCT1YKL134C 2319 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 MSN5YDR335W 3675 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY2B-DR1Q12472 REG1YDR028C 3045 nt1.84□□□□□ -2.11
TY2B-DR1Q12472 CCM1YGR150C 2595 nt1.84□□□□□ -2.11
TY2B-DR1Q12472 ZRG17YNR039C 1818 nt1.84□□□□□ -2.11
TY2B-DR1Q12472 TOM70YNL121C 1854 nt1.84□□□□□ -2.11
TY2B-DR1Q12472 FMP48YGR052W 1110 nt1.84□□□□□ -2.12
TY2B-DR1Q12472 SUR1YPL057C 1149 nt1.84□□□□□ -2.12
TY2B-DR1Q12472 KCS1YDR017C 3153 nt1.84□□□□□ -2.12
TY2B-DR1Q12472 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY2B-DR1Q12472 YDR179W-AYDR179W-A 1392 nt1.83□□□□□ -2.12
TY2B-DR1Q12472 QCR9YGR183C 201 nt1.83□□□□□ -2.12
TY2B-DR1Q12472 IOC4YMR044W 1428 nt1.83□□□□□ -2.12
TY2B-DR1Q12472 TOM1YDR457W 9807 nt1.83□□□□□ -2.12
TY2B-DR1Q12472 MIC60YKR016W 1623 nt1.83□□□□□ -2.12
TY2B-DR1Q12472 PRM2YIL037C 1971 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 YBL005W-BYBL005W-B 5268 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 BEM2YER155C 6504 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 YER023C-AYER023C-A 213 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 PRP38YGR075C 729 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 SPO13YHR014W 876 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 HIT1YJR055W 495 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 ERP1YAR002C-A 660 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 RPS29AYLR388W 171 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 MES1YGR264C 2256 nt1.82□□□□□ -2.12
TY2B-DR1Q12472 KEI1YDR367W 666 nt1.81□□□□□ -2.12
TY2B-DR1Q12472 ISW2YOR304W 3363 nt1.81□□□□□ -2.12
TY2B-DR1Q12472 LIP2YLR239C 987 nt1.8□□□□□ -2.12
TY2B-DR1Q12472 FRQ1YDR373W 573 nt1.8□□□□□ -2.12
TY2B-DR1Q12472 YER067C-AYER067C-A 324 nt1.8□□□□□ -2.12
TY2B-DR1Q12472 RNA1YMR235C 1224 nt1.8□□□□□ -2.12
TY2B-DR1Q12472 SPO22YIL073C 2928 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 YDL073WYDL073W 2955 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 ARP10YDR106W 855 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 AAR2YBL074C 1068 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 DSE4YNR067C 3354 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 RGP1YDR137W 1992 nt1.79□□□□□ -2.12
TY2B-DR1Q12472 IPT1YDR072C 1584 nt1.78□□□□□ -2.12
TY2B-DR1Q12472 YIL166CYIL166C 1629 nt1.78□□□□□ -2.13
TY2B-DR1Q12472 tV(UAC)BtV(UAC)B 74 nt1.77□□□□□ -2.13
TY2B-DR1Q12472 tV(UAC)DtV(UAC)D 74 nt1.77□□□□□ -2.13
TY2B-DR1Q12472 SPC3YLR066W 555 nt1.77□□□□□ -2.13
TY2B-DR1Q12472 YOL162WYOL162W 648 nt1.77□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 79.1 ms