Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.165e-6■■■■□ 24.1
DKC1O60832 EIF4A2-215ENST00000467585 570 ntTSL 214.45□□□□□ -0.11e-323■■■■□ 24.1
DKC1O60832 EIF4A2-208ENST00000445596 600 ntTSL 214.12□□□□□ -0.151e-323■■■■□ 24.1
DKC1O60832 EIF4A2-227ENST00000498746 579 ntTSL 211.57□□□□□ -0.561e-323■■■■□ 24.1
DKC1O60832 EIF4A2-211ENST00000465222 676 ntTSL 27.22□□□□□ -1.251e-323■■■■□ 24.1
DKC1O60832 EIF4A2-210ENST00000465032 578 ntTSL 26.79□□□□□ -1.321e-323■■■■□ 24.1
DKC1O60832 EIF4A2-212ENST00000465267 1054 ntTSL 26.79□□□□□ -1.321e-323■■■■□ 24.1
DKC1O60832 EIF4A2-224ENST00000495049 576 ntTSL 26.79□□□□□ -1.321e-323■■■■□ 24.1
DKC1O60832 EIF4A2-221ENST00000491473 579 ntTSL 26.44□□□□□ -1.381e-323■■■■□ 24.1
DKC1O60832 EIF4A2-220ENST00000486805 590 ntTSL 23.5□□□□□ -1.851e-323■■■■□ 24.1
DKC1O60832 SNORD2-201ENST00000459163 69 ntBASIC-0.95□□□□□ -2.561e-323■■■■□ 24.1
DKC1O60832 PID1-206ENST00000534952 553 ntTSL 414.79□□□□□ -0.046e-26■■■■□ 24
DKC1O60832 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.25□□□□□ -0.136e-26■■■■□ 24
DKC1O60832 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.266e-26■■■■□ 24
DKC1O60832 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.4□□□□□ -0.266e-26■■■■□ 24
DKC1O60832 PID1-201ENST00000354069 839 ntTSL 3 BASIC9.19□□□□□ -0.946e-26■■■■□ 24
DKC1O60832 PID1-205ENST00000482518 479 ntTSL 25.34□□□□□ -1.556e-26■■■■□ 24
DKC1O60832 SNORA44-201ENST00000384584 132 ntBASIC3.31□□□□□ -1.881e-323■■■■□ 23.9
DKC1O60832 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.652e-6■■■■□ 23.9
DKC1O60832 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)11.73□□□□□ -0.532e-6■■■■□ 23.9
DKC1O60832 GNL3-205ENST00000468146 533 ntTSL 411.51□□□□□ -0.573e-23■■■■□ 23.9
DKC1O60832 GNL3-210ENST00000492349 729 ntTSL 28.79□□□□□ -13e-23■■■■□ 23.9
DKC1O60832 GNL3-208ENST00000479230 547 ntTSL 44.65□□□□□ -1.673e-23■■■■□ 23.9
DKC1O60832 SNORD19.2-201ENST00000516978 73 ntBASIC3.02□□□□□ -1.933e-23■■■■□ 23.9
DKC1O60832 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.47□□□□□ -2.83e-23■■■■□ 23.9
DKC1O60832 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.765e-11■■■■□ 23.8
DKC1O60832 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.16□□□□□ -0.142e-21■■■■□ 23.7
DKC1O60832 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC13.64□□□□□ -0.232e-21■■■■□ 23.7
DKC1O60832 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.63□□□□□ -0.232e-21■■■■□ 23.7
DKC1O60832 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.392e-21■■■■□ 23.7
DKC1O60832 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.026e-7■■■■□ 23.7
DKC1O60832 FN3KRP-207ENST00000574832 1422 ntTSL 221.12■□□□□ 0.976e-7■■■■□ 23.7
DKC1O60832 FN3KRP-206ENST00000574356 887 ntTSL 520.71■□□□□ 0.916e-7■■■■□ 23.7
DKC1O60832 FN3KRP-204ENST00000573158 627 ntTSL 318.6■□□□□ 0.576e-7■■■■□ 23.7
DKC1O60832 FN3KRP-205ENST00000574206 683 ntTSL 318.16■□□□□ 0.56e-7■■■■□ 23.7
DKC1O60832 FN3KRP-209ENST00000577128 515 ntTSL 513.73□□□□□ -0.216e-7■■■■□ 23.7
DKC1O60832 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.253e-6■■■■□ 23.7
DKC1O60832 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC12.15□□□□□ -0.463e-6■■■■□ 23.7
DKC1O60832 SNORD116-18-201ENST00000383961 92 ntBASIC-0.73□□□□□ -2.538e-14■■■■□ 23.7
DKC1O60832 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.24■□□□□ 0.195e-56■■■■□ 23.7
DKC1O60832 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.385e-56■■■■□ 23.7
DKC1O60832 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.29□□□□□ -1.245e-56■■■■□ 23.7
DKC1O60832 PKN2-204ENST00000436111 632 ntTSL 33.85□□□□□ -1.795e-56■■■■□ 23.7
DKC1O60832 SNORD116-13-201ENST00000384408 92 ntBASIC1.13□□□□□ -2.233e-26■■■■□ 23.6
DKC1O60832 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC12.76□□□□□ -0.374e-6■■■■□ 23.6
DKC1O60832 DLC1-206ENST00000509922 455 ntTSL 411.31□□□□□ -0.64e-6■■■■□ 23.6
DKC1O60832 DLC1-204ENST00000503161 562 ntTSL 411.22□□□□□ -0.614e-6■■■■□ 23.6
DKC1O60832 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.854e-6■■■■□ 23.6
DKC1O60832 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.065e-10■■■■□ 23.6
DKC1O60832 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.755e-10■■■■□ 23.6
DKC1O60832 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.55□□□□□ -1.25e-10■■■■□ 23.6
DKC1O60832 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.545e-10■■■■□ 23.6
DKC1O60832 AC068580.4-202ENST00000636579 350 ntTSL 317.14■□□□□ 0.338e-7■■■■□ 23.6
DKC1O60832 TCF7L2-208ENST00000369389 691 ntTSL 427.11■■□□□ 1.939e-14■■■■□ 23.6
DKC1O60832 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.269e-14■■■■□ 23.6
DKC1O60832 PLEC-214ENST00000528131 564 ntTSL 320.98■□□□□ 0.951e-9■■■■□ 23.6
DKC1O60832 PLEC-213ENST00000528025 2115 ntTSL 520.67■□□□□ 0.91e-9■■■■□ 23.6
DKC1O60832 EHMT1-202ENST00000460486 818 ntTSL 519.27■□□□□ 0.685e-7■■■■□ 23.6
DKC1O60832 AP2A1-205ENST00000597774 2196 ntTSL 518.31■□□□□ 0.521e-9■■■■□ 23.6
DKC1O60832 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.491e-9■■■■□ 23.6
DKC1O60832 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.393e-6■■■■□ 23.6
DKC1O60832 PLEC-215ENST00000532346 316 ntTSL 317.14■□□□□ 0.331e-9■■■■□ 23.6
DKC1O60832 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.329e-14■■■■□ 23.6
DKC1O60832 AP2A1-206ENST00000600199 2381 ntTSL 516.88■□□□□ 0.291e-9■■■■□ 23.6
DKC1O60832 TCF7L2-230ENST00000637574 933 ntTSL 315.88■□□□□ 0.139e-14■■■■□ 23.6
DKC1O60832 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.039e-14■■■■□ 23.6
DKC1O60832 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.073e-6■■■■□ 23.6
DKC1O60832 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.185e-6■■■■□ 23.6
DKC1O60832 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31e-9■■■■□ 23.6
DKC1O60832 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.312e-6■■■■□ 23.6
DKC1O60832 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.365e-6■■■■□ 23.6
DKC1O60832 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.363e-6■■■■□ 23.6
DKC1O60832 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.371e-9■■■■□ 23.6
DKC1O60832 SLC44A1-205ENST00000470972 10433 ntTSL 1 (best)12.54□□□□□ -0.43e-6■■■■□ 23.6
DKC1O60832 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.411e-9■■■■□ 23.6
DKC1O60832 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.461e-9■■■■□ 23.6
DKC1O60832 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.481e-9■■■■□ 23.6
DKC1O60832 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC11.97□□□□□ -0.491e-9■■■■□ 23.6
DKC1O60832 TCF7L2-227ENST00000636585 495 ntTSL 411.46□□□□□ -0.579e-14■■■■□ 23.6
DKC1O60832 TCF7L2-203ENST00000349937 725 ntTSL 46.75□□□□□ -1.339e-14■■■■□ 23.6
DKC1O60832 TCF7L2-224ENST00000636236 582 ntTSL 24.04□□□□□ -1.769e-14■■■■□ 23.6
DKC1O60832 TCF7L2-225ENST00000636309 563 ntTSL 53.16□□□□□ -1.99e-14■■■■□ 23.6
DKC1O60832 TCF7L2-229ENST00000637416 576 ntTSL 43.13□□□□□ -1.919e-14■■■■□ 23.6
DKC1O60832 TCF7L2-228ENST00000637321 430 ntTSL 52.77□□□□□ -1.979e-14■■■■□ 23.6
DKC1O60832 TCF7L2-226ENST00000636447 550 ntTSL 41.74□□□□□ -2.139e-14■■■■□ 23.6
DKC1O60832 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.87■□□□□ 0.771e-59■■■■□ 23.6
DKC1O60832 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.9■□□□□ 0.31e-59■■■■□ 23.6
DKC1O60832 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.8□□□□□ -0.041e-59■■■■□ 23.6
DKC1O60832 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.26□□□□□ -0.131e-59■■■■□ 23.6
DKC1O60832 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.351e-59■■■■□ 23.6
DKC1O60832 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC11.39□□□□□ -0.591e-59■■■■□ 23.6
DKC1O60832 LARP4-208ENST00000520064 2068 ntTSL 511.37□□□□□ -0.591e-59■■■■□ 23.6
DKC1O60832 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.311e-59■■■■□ 23.6
DKC1O60832 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.651e-59■■■■□ 23.6
DKC1O60832 MAP2K3-206ENST00000479129 574 ntTSL 320.01■□□□□ 0.791e-323■■■■□ 23.4
DKC1O60832 MAP2K3-213ENST00000583508 607 ntTSL 519.81■□□□□ 0.761e-323■■■■□ 23.4
DKC1O60832 MAP2K3-207ENST00000483928 511 ntTSL 519.81■□□□□ 0.761e-323■■■■□ 23.4
DKC1O60832 BTF3L4-203ENST00000477828 892 ntTSL 519.17■□□□□ 0.662e-7■■■■□ 23.4
DKC1O60832 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.281e-323■■■■□ 23.4
DKC1O60832 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.28■□□□□ 0.21e-323■■■■□ 23.4
Retrieved 100 of 8,567 protein–RNA pairs in 403.1 ms