RNA–Protein interactions for RNA: ENST00000532346.1

PLEC-215, Transcript of plectin, humanhuman

TSL 3

Gene PLEC, Length 316 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-215ENST00000532346 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
PLEC-215ENST00000532346 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
PLEC-215ENST00000532346 ABCC9O60706 1549 aa33.97■■■■□ 3.03
PLEC-215ENST00000532346 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.79
PLEC-215ENST00000532346 NACADO15069 1562 aa32.25■■■□□ 2.75
PLEC-215ENST00000532346 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
PLEC-215ENST00000532346 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
PLEC-215ENST00000532346 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
PLEC-215ENST00000532346 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
PLEC-215ENST00000532346 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
PLEC-215ENST00000532346 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
PLEC-215ENST00000532346 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
PLEC-215ENST00000532346 BICRAQ9NZM4 1560 aa31.43■■■□□ 2.62
PLEC-215ENST00000532346 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
PLEC-215ENST00000532346 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
PLEC-215ENST00000532346 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
PLEC-215ENST00000532346 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
PLEC-215ENST00000532346 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
PLEC-215ENST00000532346 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
PLEC-215ENST00000532346 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
PLEC-215ENST00000532346 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
PLEC-215ENST00000532346 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
PLEC-215ENST00000532346 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
PLEC-215ENST00000532346 HMGXB3Q12766 1538 aa29.54■■■□□ 2.32
PLEC-215ENST00000532346 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
PLEC-215ENST00000532346 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
PLEC-215ENST00000532346 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
PLEC-215ENST00000532346 CUX2O14529 1486 aa29.29■■■□□ 2.28
PLEC-215ENST00000532346 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
PLEC-215ENST00000532346 NESP48681 1621 aa29.2■■■□□ 2.26
PLEC-215ENST00000532346 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
PLEC-215ENST00000532346 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
PLEC-215ENST00000532346 WIZO95785 1651 aa28.96■■■□□ 2.23
PLEC-215ENST00000532346 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
PLEC-215ENST00000532346 THOC2Q8NI27 1593 aaKnown RBP28.91■■■□□ 2.22
PLEC-215ENST00000532346 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
PLEC-215ENST00000532346 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
PLEC-215ENST00000532346 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
PLEC-215ENST00000532346 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
PLEC-215ENST00000532346 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
PLEC-215ENST00000532346 WDR62O43379 1518 aa28.55■■■□□ 2.16
PLEC-215ENST00000532346 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
PLEC-215ENST00000532346 CFTRP13569 1480 aa28.52■■■□□ 2.16
PLEC-215ENST00000532346 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
PLEC-215ENST00000532346 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
PLEC-215ENST00000532346 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
PLEC-215ENST00000532346 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
PLEC-215ENST00000532346 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
PLEC-215ENST00000532346 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
PLEC-215ENST00000532346 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
PLEC-215ENST00000532346 IFT140Q96RY7 1462 aa27.97■■■□□ 2.07
PLEC-215ENST00000532346 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
PLEC-215ENST00000532346 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
PLEC-215ENST00000532346 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
PLEC-215ENST00000532346 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
PLEC-215ENST00000532346 TARBP1Q13395 1621 aaKnown RBP27.73■■■□□ 2.03
PLEC-215ENST00000532346 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
PLEC-215ENST00000532346 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.012e-6■■□□□ 13.2
PLEC-215ENST00000532346 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
PLEC-215ENST00000532346 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
PLEC-215ENST00000532346 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
PLEC-215ENST00000532346 SOGA1O94964 1423 aa27.58■■■□□ 2.01
PLEC-215ENST00000532346 CHD1O14646 1710 aa27.58■■■□□ 2.01
PLEC-215ENST00000532346 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
PLEC-215ENST00000532346 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
PLEC-215ENST00000532346 WDR97A6NE52 1622 aa27.52■■■□□ 2
PLEC-215ENST00000532346 SUPT5HO00267 1087 aaKnown RBP27.51■■□□□ 1.99
PLEC-215ENST00000532346 CUX1P39880 1505 aa27.51■■□□□ 1.99
PLEC-215ENST00000532346 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
PLEC-215ENST00000532346 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
PLEC-215ENST00000532346 FBLN2P98095 1184 aa27.47■■□□□ 1.99
PLEC-215ENST00000532346 SNAPC4Q5SXM2 1469 aa27.37■■□□□ 1.97
PLEC-215ENST00000532346 GRIN2BQ13224 1484 aa27.34■■□□□ 1.97
PLEC-215ENST00000532346 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
PLEC-215ENST00000532346 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
PLEC-215ENST00000532346 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
PLEC-215ENST00000532346 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
PLEC-215ENST00000532346 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
PLEC-215ENST00000532346 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
PLEC-215ENST00000532346 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
PLEC-215ENST00000532346 SYNJ2O15056 1496 aa27.24■■□□□ 1.95
PLEC-215ENST00000532346 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
PLEC-215ENST00000532346 ARAP1Q96P48 1450 aa27.2■■□□□ 1.95
PLEC-215ENST00000532346 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
PLEC-215ENST00000532346 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.947e-7■■■■■ 41.8
PLEC-215ENST00000532346 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
PLEC-215ENST00000532346 TOP2BQ02880 1626 aa27.13■■□□□ 1.93
PLEC-215ENST00000532346 TRHP20396 242 aaPredicted RBP26.98■■□□□ 1.91
PLEC-215ENST00000532346 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
PLEC-215ENST00000532346 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
PLEC-215ENST00000532346 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
PLEC-215ENST00000532346 FHAD1B1AJZ9 1412 aa26.91■■□□□ 1.9
PLEC-215ENST00000532346 NUP160Q12769 1436 aa26.87■■□□□ 1.89
PLEC-215ENST00000532346 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
PLEC-215ENST00000532346 SHROOM2Q13796 1616 aa26.77■■□□□ 1.88
PLEC-215ENST00000532346 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
PLEC-215ENST00000532346 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
PLEC-215ENST00000532346 PRG4Q92954 1404 aaPredicted RBP26.62■■□□□ 1.85
PLEC-215ENST00000532346 KIF27Q86VH2 1401 aa26.61■■□□□ 1.85
PLEC-215ENST00000532346 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms