RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
SLC44A1-202ENST00000374723 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
SLC44A1-202ENST00000374723 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
SLC44A1-202ENST00000374723 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
SLC44A1-202ENST00000374723 APLP2Q06481 763 aa20.59■□□□□ 0.89
SLC44A1-202ENST00000374723 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
SLC44A1-202ENST00000374723 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
SLC44A1-202ENST00000374723 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
SLC44A1-202ENST00000374723 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
SLC44A1-202ENST00000374723 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
SLC44A1-202ENST00000374723 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
SLC44A1-202ENST00000374723 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
SLC44A1-202ENST00000374723 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
SLC44A1-202ENST00000374723 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
SLC44A1-202ENST00000374723 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
SLC44A1-202ENST00000374723 NEFLP07196 543 aa19.61■□□□□ 0.73
SLC44A1-202ENST00000374723 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
SLC44A1-202ENST00000374723 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
SLC44A1-202ENST00000374723 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
SLC44A1-202ENST00000374723 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
SLC44A1-202ENST00000374723 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
SLC44A1-202ENST00000374723 DAXXQ9UER7 740 aaPredicted RBP19.36■□□□□ 0.69
SLC44A1-202ENST00000374723 MYT1Q01538 1121 aa19.27■□□□□ 0.67
SLC44A1-202ENST00000374723 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
SLC44A1-202ENST00000374723 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
SLC44A1-202ENST00000374723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
SLC44A1-202ENST00000374723 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
SLC44A1-202ENST00000374723 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
SLC44A1-202ENST00000374723 PPARGC1BQ86YN6 1023 aaKnown RBP19.05■□□□□ 0.64
SLC44A1-202ENST00000374723 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
SLC44A1-202ENST00000374723 ITGAEP38570 1179 aa19.02■□□□□ 0.64
SLC44A1-202ENST00000374723 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
SLC44A1-202ENST00000374723 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
SLC44A1-202ENST00000374723 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
SLC44A1-202ENST00000374723 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
SLC44A1-202ENST00000374723 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
SLC44A1-202ENST00000374723 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
SLC44A1-202ENST00000374723 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
SLC44A1-202ENST00000374723 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
SLC44A1-202ENST00000374723 BCL11AQ9H165 835 aa18.45■□□□□ 0.54
SLC44A1-202ENST00000374723 HRCP23327 699 aa18.44■□□□□ 0.54
SLC44A1-202ENST00000374723 BCANQ96GW7 911 aa18.42■□□□□ 0.54
SLC44A1-202ENST00000374723 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.52
SLC44A1-202ENST00000374723 CANXP27824 592 aaKnown RBP18.32■□□□□ 0.52
SLC44A1-202ENST00000374723 NEUROD1Q13562 356 aa18.3■□□□□ 0.52
SLC44A1-202ENST00000374723 NEFMP07197 916 aa18.29■□□□□ 0.52
SLC44A1-202ENST00000374723 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
SLC44A1-202ENST00000374723 FBLN2P98095 1184 aa18.23■□□□□ 0.51
SLC44A1-202ENST00000374723 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
SLC44A1-202ENST00000374723 ANP32CO43423 234 aa18.15■□□□□ 0.5
SLC44A1-202ENST00000374723 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
SLC44A1-202ENST00000374723 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
SLC44A1-202ENST00000374723 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SLC44A1-202ENST00000374723 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
SLC44A1-202ENST00000374723 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLC44A1-202ENST00000374723 ANP32BQ92688 251 aaKnown RBP17.93■□□□□ 0.46
SLC44A1-202ENST00000374723 HSP90AA1P07900 732 aaKnown RBP17.93■□□□□ 0.46
SLC44A1-202ENST00000374723 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
SLC44A1-202ENST00000374723 ANP32AP39687 249 aaKnown RBP17.9■□□□□ 0.46
SLC44A1-202ENST00000374723 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
SLC44A1-202ENST00000374723 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
SLC44A1-202ENST00000374723 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
SLC44A1-202ENST00000374723 P3H3Q8IVL6 736 aa17.8■□□□□ 0.44
SLC44A1-202ENST00000374723 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
SLC44A1-202ENST00000374723 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
SLC44A1-202ENST00000374723 ABCC9O60706 1549 aa17.77■□□□□ 0.44
SLC44A1-202ENST00000374723 A0A0G2JS52 829 aa17.77■□□□□ 0.44
SLC44A1-202ENST00000374723 UPF2Q9HAU5 1272 aaKnown RBP17.77■□□□□ 0.43
SLC44A1-202ENST00000374723 CDK11BP21127 795 aaKnown RBP17.73■□□□□ 0.43
SLC44A1-202ENST00000374723 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
SLC44A1-202ENST00000374723 NPM1P06748 294 aaKnown RBP eCLIP17.67■□□□□ 0.42
SLC44A1-202ENST00000374723 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.41
SLC44A1-202ENST00000374723 PLEKHG5O94827 1062 aa17.55■□□□□ 0.4
SLC44A1-202ENST00000374723 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
SLC44A1-202ENST00000374723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLC44A1-202ENST00000374723 ARXQ96QS3 562 aa17.54■□□□□ 0.4
SLC44A1-202ENST00000374723 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
SLC44A1-202ENST00000374723 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
SLC44A1-202ENST00000374723 FAM9BQ8IZU0 186 aa17.51■□□□□ 0.39
SLC44A1-202ENST00000374723 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
SLC44A1-202ENST00000374723 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
SLC44A1-202ENST00000374723 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
SLC44A1-202ENST00000374723 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
SLC44A1-202ENST00000374723 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
SLC44A1-202ENST00000374723 FKBP8Q14318 412 aa17.46■□□□□ 0.39
SLC44A1-202ENST00000374723 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
SLC44A1-202ENST00000374723 TULP1O00294 542 aaPredicted RBP17.43■□□□□ 0.38
SLC44A1-202ENST00000374723 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
SLC44A1-202ENST00000374723 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
SLC44A1-202ENST00000374723 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
SLC44A1-202ENST00000374723 NBR1Q14596 966 aa17.38■□□□□ 0.37
SLC44A1-202ENST00000374723 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
SLC44A1-202ENST00000374723 PPP1R15AO75807 674 aaPredicted RBP17.34■□□□□ 0.37
SLC44A1-202ENST00000374723 CHIC2Q9UKJ5 165 aa17.33■□□□□ 0.36
SLC44A1-202ENST00000374723 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
SLC44A1-202ENST00000374723 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
SLC44A1-202ENST00000374723 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
SLC44A1-202ENST00000374723 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
SLC44A1-202ENST00000374723 ZRSR1Q15695 479 aaKnown RBP17.28■□□□□ 0.36
SLC44A1-202ENST00000374723 NPHP1O15259 732 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms