RNA–Protein interactions for RNA: ENST00000614335.4

LARP4-219, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 5 BASIC

Gene LARP4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-219ENST00000614335 NISCHQ9Y2I1 1504 aa36.7■■■■□ 3.47
LARP4-219ENST00000614335 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
LARP4-219ENST00000614335 ABCC9O60706 1549 aa32.06■■■□□ 2.72
LARP4-219ENST00000614335 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
LARP4-219ENST00000614335 NACADO15069 1562 aa30.77■■■□□ 2.52
LARP4-219ENST00000614335 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
LARP4-219ENST00000614335 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
LARP4-219ENST00000614335 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
LARP4-219ENST00000614335 DCAF1Q9Y4B6 1507 aa30.38■■■□□ 2.45
LARP4-219ENST00000614335 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.41
LARP4-219ENST00000614335 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.38
LARP4-219ENST00000614335 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
LARP4-219ENST00000614335 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
LARP4-219ENST00000614335 SHROOM4Q9ULL8 1493 aa29.59■■■□□ 2.33
LARP4-219ENST00000614335 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
LARP4-219ENST00000614335 EIF4G1Q04637 1599 aaKnown RBP29.11■■■□□ 2.25
LARP4-219ENST00000614335 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
LARP4-219ENST00000614335 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
LARP4-219ENST00000614335 SMARCA4P51532 1647 aa28.51■■■□□ 2.16
LARP4-219ENST00000614335 BAZ1AQ9NRL2 1556 aaPredicted RBP28.48■■■□□ 2.15
LARP4-219ENST00000614335 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
LARP4-219ENST00000614335 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
LARP4-219ENST00000614335 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
LARP4-219ENST00000614335 MROH2BQ7Z745 1585 aa28.27■■■□□ 2.12
LARP4-219ENST00000614335 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
LARP4-219ENST00000614335 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
LARP4-219ENST00000614335 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
LARP4-219ENST00000614335 WIZO95785 1651 aa27.98■■■□□ 2.07
LARP4-219ENST00000614335 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
LARP4-219ENST00000614335 NESP48681 1621 aa27.71■■■□□ 2.03
LARP4-219ENST00000614335 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
LARP4-219ENST00000614335 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
LARP4-219ENST00000614335 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
LARP4-219ENST00000614335 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
LARP4-219ENST00000614335 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
LARP4-219ENST00000614335 CUX2O14529 1486 aa27.42■■□□□ 1.98
LARP4-219ENST00000614335 KIF21AQ7Z4S6 1674 aa27.42■■□□□ 1.98
LARP4-219ENST00000614335 CFTRP13569 1480 aa27.36■■□□□ 1.97
LARP4-219ENST00000614335 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
LARP4-219ENST00000614335 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
LARP4-219ENST00000614335 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
LARP4-219ENST00000614335 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
LARP4-219ENST00000614335 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.94
LARP4-219ENST00000614335 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
LARP4-219ENST00000614335 WDR62O43379 1518 aa27.11■■□□□ 1.93
LARP4-219ENST00000614335 SUPT5HO00267 1087 aaKnown RBP27.11■■□□□ 1.93
LARP4-219ENST00000614335 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
LARP4-219ENST00000614335 ABCC8Q09428 1581 aa26.79■■□□□ 1.88
LARP4-219ENST00000614335 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
LARP4-219ENST00000614335 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
LARP4-219ENST00000614335 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
LARP4-219ENST00000614335 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
LARP4-219ENST00000614335 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
LARP4-219ENST00000614335 CUX1P39880 1505 aa26.54■■□□□ 1.84
LARP4-219ENST00000614335 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
LARP4-219ENST00000614335 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
LARP4-219ENST00000614335 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
LARP4-219ENST00000614335 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
LARP4-219ENST00000614335 SOGA1O94964 1423 aa26.43■■□□□ 1.82
LARP4-219ENST00000614335 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
LARP4-219ENST00000614335 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.811e-8■■■■■ 37.4
LARP4-219ENST00000614335 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
LARP4-219ENST00000614335 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
LARP4-219ENST00000614335 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
LARP4-219ENST00000614335 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
LARP4-219ENST00000614335 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
LARP4-219ENST00000614335 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
LARP4-219ENST00000614335 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
LARP4-219ENST00000614335 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
LARP4-219ENST00000614335 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
LARP4-219ENST00000614335 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
LARP4-219ENST00000614335 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
LARP4-219ENST00000614335 CHD1O14646 1710 aa26.13■■□□□ 1.77
LARP4-219ENST00000614335 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
LARP4-219ENST00000614335 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
LARP4-219ENST00000614335 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
LARP4-219ENST00000614335 FBLN2P98095 1184 aa26.06■■□□□ 1.76
LARP4-219ENST00000614335 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
LARP4-219ENST00000614335 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
LARP4-219ENST00000614335 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
LARP4-219ENST00000614335 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
LARP4-219ENST00000614335 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
LARP4-219ENST00000614335 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
LARP4-219ENST00000614335 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
LARP4-219ENST00000614335 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
LARP4-219ENST00000614335 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
LARP4-219ENST00000614335 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.72
LARP4-219ENST00000614335 GRIN2AQ12879 1464 aa25.82■■□□□ 1.72
LARP4-219ENST00000614335 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
LARP4-219ENST00000614335 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
LARP4-219ENST00000614335 NUP160Q12769 1436 aa25.69■■□□□ 1.7
LARP4-219ENST00000614335 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
LARP4-219ENST00000614335 IGF1RP08069 1367 aa25.67■■□□□ 1.7
LARP4-219ENST00000614335 CUL7Q14999 1698 aa25.67■■□□□ 1.7
LARP4-219ENST00000614335 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
LARP4-219ENST00000614335 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
LARP4-219ENST00000614335 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
LARP4-219ENST00000614335 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
LARP4-219ENST00000614335 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
LARP4-219ENST00000614335 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms