Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YDR131CYDR131C 1671 nt2.37□□□□□ -2.03
RRP40Q08285 ARP9YMR033W 1404 nt2.37□□□□□ -2.03
RRP40Q08285 SNU23YDL098C 585 nt2.37□□□□□ -2.03
RRP40Q08285 AI3Q0060 1248 nt2.37□□□□□ -2.03
RRP40Q08285 FMN1YDR236C 657 nt2.37□□□□□ -2.03
RRP40Q08285 MST27YGL051W 705 nt2.37□□□□□ -2.03
RRP40Q08285 PFS1YHR185C 714 nt2.37□□□□□ -2.03
RRP40Q08285 YIL054WYIL054W 318 nt2.37□□□□□ -2.03
RRP40Q08285 EMC6YLL014W 327 nt2.37□□□□□ -2.03
RRP40Q08285 YNL043CYNL043C 321 nt2.37□□□□□ -2.03
RRP40Q08285 ATG34YOL083W 1239 nt2.37□□□□□ -2.03
RRP40Q08285 THI80YOR143C 960 nt2.37□□□□□ -2.03
RRP40Q08285 PIS1YPR113W 663 nt2.37□□□□□ -2.03
RRP40Q08285 AI4Q0065 1671 nt2.37□□□□□ -2.03
RRP40Q08285 SMY2YBR172C 2223 nt2.37□□□□□ -2.03
RRP40Q08285 PEX6YNL329C 3093 nt2.36□□□□□ -2.03
RRP40Q08285 YER079C-AYER079C-A 339 nt2.36□□□□□ -2.03
RRP40Q08285 YGL159WYGL159W 1113 nt2.36□□□□□ -2.03
RRP40Q08285 PPE1YHR075C 1203 nt2.36□□□□□ -2.03
RRP40Q08285 AIM4YBR194W 372 nt2.36□□□□□ -2.03
RRP40Q08285 ERV15YBR210W 429 nt2.36□□□□□ -2.03
RRP40Q08285 TMA64YDR117C 1698 nt2.36□□□□□ -2.03
RRP40Q08285 YKU80YMR106C 1890 nt2.36□□□□□ -2.03
RRP40Q08285 YBR259WYBR259W 2067 nt2.36□□□□□ -2.03
RRP40Q08285 TOP2YNL088W 4287 nt2.36□□□□□ -2.03
RRP40Q08285 YNL011CYNL011C 1335 nt2.36□□□□□ -2.03
RRP40Q08285 SEC16YPL085W 6588 nt2.35□□□□□ -2.03
RRP40Q08285 MSH4YFL003C 2637 nt2.35□□□□□ -2.03
RRP40Q08285 RIM13YMR154C 2184 nt2.35□□□□□ -2.03
RRP40Q08285 MFA1YDR461W 111 nt2.35□□□□□ -2.03
RRP40Q08285 YKL070WYKL070W 510 nt2.35□□□□□ -2.03
RRP40Q08285 TPT1YOL102C 693 nt2.35□□□□□ -2.03
RRP40Q08285 ATP3YBR039W 936 nt2.35□□□□□ -2.03
RRP40Q08285 UBP15YMR304W 3693 nt2.35□□□□□ -2.03
RRP40Q08285 MRD1YPR112C 2664 nt2.35□□□□□ -2.03
RRP40Q08285 AVT2YEL064C 1443 nt2.34□□□□□ -2.03
RRP40Q08285 YDR210W-BYDR210W-B 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YDR261W-BYDR261W-B 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YFL002W-AYFL002W-A 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YGR161W-BYGR161W-B 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YLR410W-BYLR410W-B 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YCL019WYCL019W 5313 nt2.34□□□□□ -2.03
RRP40Q08285 YDR186CYDR186C 2634 nt2.34□□□□□ -2.03
RRP40Q08285 HLR1YDR528W 1272 nt2.34□□□□□ -2.03
RRP40Q08285 YHR182C-AYHR182C-A 474 nt2.34□□□□□ -2.03
RRP40Q08285 MET14YKL001C 609 nt2.34□□□□□ -2.03
RRP40Q08285 YOL118CYOL118C 309 nt2.34□□□□□ -2.03
RRP40Q08285 GRX7YBR014C 612 nt2.34□□□□□ -2.03
RRP40Q08285 KAR4YCL055W 1008 nt2.34□□□□□ -2.03
RRP40Q08285 SAK1YER129W 3429 nt2.33□□□□□ -2.04
RRP40Q08285 SOK1YDR006C 2706 nt2.33□□□□□ -2.04
RRP40Q08285 RPL13AYDL082W 600 nt2.33□□□□□ -2.04
RRP40Q08285 HMO1YDR174W 741 nt2.33□□□□□ -2.04
RRP40Q08285 YHL006W-AYHL006W-A 354 nt2.33□□□□□ -2.04
RRP40Q08285 TCD1YHR003C 1290 nt2.33□□□□□ -2.04
RRP40Q08285 NNF1YJR112W 606 nt2.33□□□□□ -2.04
RRP40Q08285 YMR099CYMR099C 894 nt2.33□□□□□ -2.04
RRP40Q08285 ATG16YMR159C 453 nt2.33□□□□□ -2.04
RRP40Q08285 PDR17YNL264C 1053 nt2.33□□□□□ -2.04
RRP40Q08285 TSR4YOL022C 1227 nt2.33□□□□□ -2.04
RRP40Q08285 PEX15YOL044W 1152 nt2.33□□□□□ -2.04
RRP40Q08285 YOR055WYOR055W 435 nt2.33□□□□□ -2.04
RRP40Q08285 RRG7YOR305W 729 nt2.33□□□□□ -2.04
RRP40Q08285 RPL36BYPL249C-A 303 nt2.33□□□□□ -2.04
RRP40Q08285 PHO2YDL106C 1680 nt2.32□□□□□ -2.04
RRP40Q08285 YGL176CYGL176C 1665 nt2.32□□□□□ -2.04
RRP40Q08285 MCR1YKL150W 909 nt2.32□□□□□ -2.04
RRP40Q08285 CDC123YLR215C 1083 nt2.32□□□□□ -2.04
RRP40Q08285 RPL6BYLR448W 531 nt2.32□□□□□ -2.04
RRP40Q08285 PRM6YML047C 1059 nt2.32□□□□□ -2.04
RRP40Q08285 KTI11YBL071W-A 249 nt2.32□□□□□ -2.04
RRP40Q08285 MLH1YMR167W 2310 nt2.32□□□□□ -2.04
RRP40Q08285 ORC2YBR060C 1863 nt2.32□□□□□ -2.04
RRP40Q08285 URB2YJR041C 3525 nt2.32□□□□□ -2.04
RRP40Q08285 ARP8YOR141C 2646 nt2.32□□□□□ -2.04
RRP40Q08285 CSF1YLR087C 8877 nt2.32□□□□□ -2.04
RRP40Q08285 SLN1YIL147C 3663 nt2.31□□□□□ -2.04
RRP40Q08285 IPI3YNL182C 1668 nt2.31□□□□□ -2.04
RRP40Q08285 MUB1YMR100W 1863 nt2.31□□□□□ -2.04
RRP40Q08285 GCD2YGR083C 1956 nt2.31□□□□□ -2.04
RRP40Q08285 snR68snR68 136 nt2.31□□□□□ -2.04
RRP40Q08285 RGI1YER067W 486 nt2.31□□□□□ -2.04
RRP40Q08285 YIL156W-BYIL156W-B 222 nt2.31□□□□□ -2.04
RRP40Q08285 YLR163W-AYLR163W-A 114 nt2.31□□□□□ -2.04
RRP40Q08285 GSP1YLR293C 660 nt2.31□□□□□ -2.04
RRP40Q08285 YNL276CYNL276C 396 nt2.31□□□□□ -2.04
RRP40Q08285 UTP15YMR093W 1542 nt2.31□□□□□ -2.04
RRP40Q08285 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
RRP40Q08285 YJL169WYJL169W 369 nt2.3□□□□□ -2.04
RRP40Q08285 SRL3YKR091W 741 nt2.3□□□□□ -2.04
RRP40Q08285 YLR412C-AYLR412C-A 207 nt2.3□□□□□ -2.04
RRP40Q08285 MIC27YNL100W 705 nt2.3□□□□□ -2.04
RRP40Q08285 GCY1YOR120W 939 nt2.3□□□□□ -2.04
RRP40Q08285 CSH1YBR161W 1131 nt2.3□□□□□ -2.04
RRP40Q08285 GCD10YNL062C 1437 nt2.3□□□□□ -2.04
RRP40Q08285 DSE1YER124C 1722 nt2.3□□□□□ -2.04
RRP40Q08285 CDC5YMR001C 2118 nt2.3□□□□□ -2.04
RRP40Q08285 KHA1YJL094C 2622 nt2.3□□□□□ -2.04
RRP40Q08285 PSD2YGR170W 3417 nt2.29□□□□□ -2.04
RRP40Q08285 BOI1YBL085W 2943 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 54 ms