Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 TRA1YHR099W 11235 nt2.61□□□□□ -1.99
VPS3P23643 AIM6YDL237W 1173 nt2.6□□□□□ -1.99
VPS3P23643 PAU14YIL176C 363 nt2.6□□□□□ -1.99
VPS3P23643 PAU1YJL223C 363 nt2.6□□□□□ -1.99
VPS3P23643 OMA1YKR087C 1038 nt2.6□□□□□ -1.99
VPS3P23643 DUG3YNL191W 1074 nt2.6□□□□□ -1.99
VPS3P23643 YOL114CYOL114C 609 nt2.6□□□□□ -1.99
VPS3P23643 YOR283WYOR283W 693 nt2.6□□□□□ -1.99
VPS3P23643 KAR4YCL055W 1008 nt2.6□□□□□ -1.99
VPS3P23643 FAR11YNL127W 2862 nt2.6□□□□□ -1.99
VPS3P23643 YDR061WYDR061W 1620 nt2.6□□□□□ -1.99
VPS3P23643 IRC3YDR332W 2070 nt2.59□□□□□ -1.99
VPS3P23643 OSW7YFR039C 1533 nt2.59□□□□□ -1.99
VPS3P23643 PET100YDR079W 336 nt2.59□□□□□ -1.99
VPS3P23643 IMP3YHR148W 552 nt2.59□□□□□ -1.99
VPS3P23643 RPS29AYLR388W 171 nt2.59□□□□□ -1.99
VPS3P23643 YMR194C-AYMR194C-A 225 nt2.59□□□□□ -1.99
VPS3P23643 ATP22YDR350C 2055 nt2.59□□□□□ -2
VPS3P23643 NUP170YBL079W 4509 nt2.58□□□□□ -2
VPS3P23643 KAR5YMR065W 1515 nt2.58□□□□□ -2
VPS3P23643 WHI3YNL197C 1986 nt2.58□□□□□ -2
VPS3P23643 KRE33YNL132W 3171 nt2.58□□□□□ -2
VPS3P23643 YBR259WYBR259W 2067 nt2.58□□□□□ -2
VPS3P23643 PHO2YDL106C 1680 nt2.58□□□□□ -2
VPS3P23643 RSM24YDR175C 960 nt2.58□□□□□ -2
VPS3P23643 RPL24BYGR148C 468 nt2.58□□□□□ -2
VPS3P23643 OTU2YHL013C 924 nt2.58□□□□□ -2
VPS3P23643 SGT1YOR057W 1188 nt2.58□□□□□ -2
VPS3P23643 LTP1YPR073C 486 nt2.58□□□□□ -2
VPS3P23643 KEL2YGR238C 2649 nt2.57□□□□□ -2
VPS3P23643 YKR078WYKR078W 1758 nt2.57□□□□□ -2
VPS3P23643 YBT1YLL048C 4986 nt2.57□□□□□ -2
VPS3P23643 PEA2YER149C 1263 nt2.57□□□□□ -2
VPS3P23643 YJR071WYJR071W 369 nt2.57□□□□□ -2
VPS3P23643 END3YNL084C 1050 nt2.57□□□□□ -2
VPS3P23643 AVT5YBL089W 1380 nt2.57□□□□□ -2
VPS3P23643 SAK1YER129W 3429 nt2.56□□□□□ -2
VPS3P23643 APC5YOR249C 2058 nt2.56□□□□□ -2
VPS3P23643 YCR024C-BYCR024C-B 267 nt2.56□□□□□ -2
VPS3P23643 TIM11YDR322C-A 291 nt2.56□□□□□ -2
VPS3P23643 YGR168CYGR168C 1131 nt2.56□□□□□ -2
VPS3P23643 CWC24YLR323C 780 nt2.56□□□□□ -2
VPS3P23643 YNL171CYNL171C 369 nt2.56□□□□□ -2
VPS3P23643 MCT1YOR221C 1083 nt2.56□□□□□ -2
VPS3P23643 YNR066CYNR066C 1311 nt2.56□□□□□ -2
VPS3P23643 MRD1YPR112C 2664 nt2.56□□□□□ -2
VPS3P23643 RIT1YMR283C 1542 nt2.56□□□□□ -2
VPS3P23643 SST2YLR452C 2097 nt2.56□□□□□ -2
VPS3P23643 GCV2YMR189W 3105 nt2.55□□□□□ -2
VPS3P23643 SCP160YJL080C 3669 nt2.55□□□□□ -2
VPS3P23643 TMA64YDR117C 1698 nt2.55□□□□□ -2
VPS3P23643 YDR320W-BYDR320W-B 138 nt2.55□□□□□ -2
VPS3P23643 YFR010W-AYFR010W-A 189 nt2.55□□□□□ -2
VPS3P23643 YGR293CYGR293C 462 nt2.55□□□□□ -2
VPS3P23643 RGI2YIL057C 495 nt2.55□□□□□ -2
VPS3P23643 SLN1YIL147C 3663 nt2.55□□□□□ -2
VPS3P23643 PSY1YKL076C 384 nt2.55□□□□□ -2
VPS3P23643 RRP14YKL082C 1305 nt2.55□□□□□ -2
VPS3P23643 NNT1YLR285W 786 nt2.55□□□□□ -2
VPS3P23643 COQ10YOL008W 624 nt2.55□□□□□ -2
VPS3P23643 YOR203WYOR203W 354 nt2.55□□□□□ -2
VPS3P23643 SUT2YPR009W 807 nt2.55□□□□□ -2
VPS3P23643 PSP1YDR505C 2526 nt2.54□□□□□ -2
VPS3P23643 TCA17YEL048C 459 nt2.54□□□□□ -2
VPS3P23643 MST27YGL051W 705 nt2.54□□□□□ -2
VPS3P23643 AYR1YIL124W 894 nt2.54□□□□□ -2
VPS3P23643 ARC19YKL013C 516 nt2.54□□□□□ -2
VPS3P23643 HOT13YKL084W 351 nt2.54□□□□□ -2
VPS3P23643 IZH4YOL101C 939 nt2.54□□□□□ -2
VPS3P23643 YOL166CYOL166C 339 nt2.54□□□□□ -2
VPS3P23643 SRL1YOR247W 633 nt2.54□□□□□ -2
VPS3P23643 ANR2YKL047W 1551 nt2.53□□□□□ -2
VPS3P23643 TMN3YER113C 2121 nt2.53□□□□□ -2
VPS3P23643 RRI1YDL216C 1323 nt2.53□□□□□ -2
VPS3P23643 COBQ0105 1158 nt2.53□□□□□ -2
VPS3P23643 UPF3YGR072W 1164 nt2.53□□□□□ -2
VPS3P23643 YAL037WYAL037W 804 nt2.53□□□□□ -2
VPS3P23643 KTI11YBL071W-A 249 nt2.53□□□□□ -2
VPS3P23643 YOL107WYOL107W 1029 nt2.53□□□□□ -2
VPS3P23643 YOR055WYOR055W 435 nt2.53□□□□□ -2
VPS3P23643 CBP6YBR120C 489 nt2.53□□□□□ -2
VPS3P23643 SHG1YBR258C 429 nt2.53□□□□□ -2
VPS3P23643 URB2YJR041C 3525 nt2.52□□□□□ -2.01
VPS3P23643 SPF1YEL031W 3648 nt2.52□□□□□ -2.01
VPS3P23643 YER079C-AYER079C-A 339 nt2.52□□□□□ -2.01
VPS3P23643 GET1YGL020C 708 nt2.52□□□□□ -2.01
VPS3P23643 YIL156W-BYIL156W-B 222 nt2.52□□□□□ -2.01
VPS3P23643 CCW14YLR390W-A 717 nt2.52□□□□□ -2.01
VPS3P23643 ECM13YBL043W 774 nt2.52□□□□□ -2.01
VPS3P23643 YMR187CYMR187C 1296 nt2.52□□□□□ -2.01
VPS3P23643 MIC27YNL100W 705 nt2.52□□□□□ -2.01
VPS3P23643 ATP3YBR039W 936 nt2.52□□□□□ -2.01
VPS3P23643 CTP1YBR291C 900 nt2.52□□□□□ -2.01
VPS3P23643 YGL176CYGL176C 1665 nt2.52□□□□□ -2.01
VPS3P23643 TRS130YMR218C 3309 nt2.52□□□□□ -2.01
VPS3P23643 APL5YPL195W 2799 nt2.52□□□□□ -2.01
VPS3P23643 NEL1YHR035W 1893 nt2.52□□□□□ -2.01
VPS3P23643 IRA2YOL081W 9240 nt2.52□□□□□ -2.01
VPS3P23643 STE11YLR362W 2154 nt2.51□□□□□ -2.01
VPS3P23643 YEF3YLR249W 3135 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 7 ms