Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 NOP14YDL148C 2433 nt2.31□□□□□ -2.04
TY1B-PR2P0C2J0 NAN1YPL126W 2691 nt2.31□□□□□ -2.04
TY1B-PR2P0C2J0 TRX1YLR043C 312 nt2.31□□□□□ -2.04
TY1B-PR2P0C2J0 YOL057WYOL057W 2136 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 PHO12YHR215W 1404 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 PHO11YAR071W 1404 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 SMX2YFL017W-A 234 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 SWD3YBR175W 948 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 ROM2YLR371W 4071 nt2.3□□□□□ -2.04
TY1B-PR2P0C2J0 CTF13YMR094W 1437 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 YJR056CYJR056C 711 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 ERP1YAR002C-A 660 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 MRPL33YMR286W 261 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 ATG34YOL083W 1239 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
TY1B-PR2P0C2J0 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 YGR293CYGR293C 462 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 YML094C-AYML094C-A 402 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 RRP7YCL031C 894 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 SIR3YLR442C 2937 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 GNT1YOR320C 1476 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 PRP6YBR055C 2700 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 GPP2YER062C 753 nt2.28□□□□□ -2.04
TY1B-PR2P0C2J0 VBA4YDR119W 2307 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 CSF1YLR087C 8877 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 TMA64YDR117C 1698 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 ISW2YOR304W 3363 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 RIM13YMR154C 2184 nt2.27□□□□□ -2.05
TY1B-PR2P0C2J0 YOR192C-BYOR192C-B 5313 nt2.26□□□□□ -2.05
TY1B-PR2P0C2J0 YOR292CYOR292C 930 nt2.26□□□□□ -2.05
TY1B-PR2P0C2J0 TAF14YPL129W 735 nt2.26□□□□□ -2.05
TY1B-PR2P0C2J0 HHF2YNL030W 312 nt2.26□□□□□ -2.05
TY1B-PR2P0C2J0 NNT1YLR285W 786 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 YLR462WYLR462W 609 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 YBR090CYBR090C 369 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 CSH1YBR161W 1131 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 ORC2YBR060C 1863 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 YJL113WYJL113W 4647 nt2.25□□□□□ -2.05
TY1B-PR2P0C2J0 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
TY1B-PR2P0C2J0 UBP3YER151C 2739 nt2.24□□□□□ -2.05
TY1B-PR2P0C2J0 COS6YGR295C 1146 nt2.24□□□□□ -2.05
TY1B-PR2P0C2J0 IST1YNL265C 897 nt2.24□□□□□ -2.05
TY1B-PR2P0C2J0 CLU1YMR012W 3834 nt2.24□□□□□ -2.05
TY1B-PR2P0C2J0 TOP2YNL088W 4287 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 YBL029C-AYBL029C-A 285 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 YBL096CYBL096C 309 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 SMY2YBR172C 2223 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 BNI1YNL271C 5862 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 YBP1YBR216C 2025 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 EAF5YEL018W 840 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 FMP48YGR052W 1110 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 SLX9YGR081C 633 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 MAC1YMR021C 1254 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 MIC60YKR016W 1623 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 PHR1YOR386W 1698 nt2.23□□□□□ -2.05
TY1B-PR2P0C2J0 DSN1YIR010W 1731 nt2.22□□□□□ -2.05
TY1B-PR2P0C2J0 FRQ1YDR373W 573 nt2.22□□□□□ -2.05
TY1B-PR2P0C2J0 PSY3YLR376C 729 nt2.22□□□□□ -2.05
TY1B-PR2P0C2J0 VPS35YJL154C 2835 nt2.22□□□□□ -2.05
TY1B-PR2P0C2J0 TOM70YNL121C 1854 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 YML003WYML003W 873 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 BUD3YCL014W 4911 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)E1tH(GUG)E1 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)E2tH(GUG)E2 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)G1tH(GUG)G1 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)G2tH(GUG)G2 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)HtH(GUG)H 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)KtH(GUG)K 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 tH(GUG)MtH(GUG)M 72 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 YPR177CYPR177C 372 nt2.21□□□□□ -2.06
TY1B-PR2P0C2J0 YGR237CYGR237C 2358 nt2.2□□□□□ -2.06
TY1B-PR2P0C2J0 YIL102CYIL102C 306 nt2.2□□□□□ -2.06
TY1B-PR2P0C2J0 APM3YBR288C 1452 nt2.2□□□□□ -2.06
TY1B-PR2P0C2J0 YDR098C-BYDR098C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YDR210C-DYDR210C-D 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YDR316W-BYDR316W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YDR365W-BYDR365W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YER138CYER138C 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YER160CYER160C 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YGR038C-BYGR038C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YGR161C-DYGR161C-D 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YJR027WYJR027W 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YLR157C-BYLR157C-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YML039WYML039W 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YML045WYML045W 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YMR050CYMR050C 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YOL103W-BYOL103W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YBR012W-BYBR012W-B 5271 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YOR142W-BYOR142W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YPL257W-BYPL257W-B 5268 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YPR158W-BYPR158W-B 5271 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 SPS2YDR522C 1509 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 TAM41YGR046W 1158 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 YJL015CYJL015C 285 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 STP1YDR463W 1560 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 GSH2YOL049W 1476 nt2.19□□□□□ -2.06
TY1B-PR2P0C2J0 ATP17YDR377W 306 nt2.18□□□□□ -2.06
TY1B-PR2P0C2J0 HPA3YEL066W 540 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms